RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 AURKBQ96GD4 344 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 NAA11Q9BSU3 229 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 SF3B5Q9BWJ5 86 aaKnown RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 SLC38A1Q9H2H9 487 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 POLE3Q9NRF9 147 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 ATAD3AQ9NVI7 634 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 TMEM45AQ9NWC5 275 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ASIC5Q9NY37 505 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 PCDHGB4Q9UN71 923 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 WDR45Q9Y484 360 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 SPIN1Q9Y657 262 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 DYSFO75923 2080 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 RNF103-CHMP3A0A140T963 221 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 PRSS51A0A1B0GVH4 220 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 AGAP5A6NIR3 686 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 AQP7P3A6NL99 342 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 LYNX1G3V0Z9 82 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 HMGN4O00479 90 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 RNASET2O00584 256 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 COPEO14579 308 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 WNT9BO14905 357 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 FZD7O75084 574 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 NPIPB7O75200 414 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 UPK3AO75631 287 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF432O94892 652 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 AKR7A3O95154 331 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CRYAAP02489 173 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CELA3BP08861 270 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CBR1P16152 277 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 KRT4P19013 534 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 RPS4Y1P22090 263 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 PAX7P23759 505 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 APEX1P27695 318 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 TACR3P29371 465 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ACAA2P42765 397 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 SLC1A3P43003 542 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 HTR3AP46098 478 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 SELENOPP49908 381 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 POLR2HP52434 150 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 MAP2K6P52564 334 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CHN2P52757 468 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ARFIP2P53365 341 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 TUBA1BP68363 451 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 TUBA4AP68366 448 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 POU3F1Q03052 451 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 EMX2Q04743 252 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CEACAM7Q14002 265 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CASP8Q14790 479 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 SYPL1Q16563 259 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ELFN2Q5R3F8 820 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 OTUD3Q5T2D3 398 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 TNFAIP8L2Q6P589 184 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 NHLRC1Q6VVB1 395 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 C12orf54Q6X4T0 127 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZCCHC23Q6ZST2 131 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CREB3L2Q70SY1 520 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 TUBA1AQ71U36 451 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 SLC46A3Q7Z3Q1 461 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 SPATA19Q7Z5L4 167 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 C4orf33Q8N1A6 199 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ARFGAP2Q8N6H7 521 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ANKFN1Q8N957 763 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 FNDC5Q8NAU1 212 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 NUP37Q8NFH4 326 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 OR4F15Q8NGB8 312 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF837Q96EG3 531 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 NEURL3Q96EH8 262 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 SLC35G5Q96KT7 338 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF75AQ96N20 296 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF317Q96PQ6 595 aaPredicted RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
VRK3-220ENST00000600259 MECRQ9BV79 373 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 LINC00470Q9BZP3 86 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 RAB1BQ9H0U4 201 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 ZNF442Q9H7R0 627 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 EXD2Q9NVH0 621 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 MKS1Q9NXB0 559 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 CHST2Q9Y4C5 530 aa5.28□□□□□ -1.56
VRK3-220ENST00000600259 A0A096LPE4 126 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 IGHV2OR16-5A0A0B4J2B6 119 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 A0A1W2PPZ6 126 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 FAM157AC9JC47 383 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 FTCDNL1E5RQL4 147 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 hCG_2039718K7EN88 272 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 AGR2O95994 175 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 AVPP01185 164 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 CHRM4P08173 479 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 NPR2P20594 1047 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 UQCRC2P22695 453 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 COL8A2P25067 703 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 SOAT1P35610 550 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 SRP14P37108 136 aaKnown RBP5.27□□□□□ -1.57
VRK3-220ENST00000600259 LMO4P61968 165 aa5.27□□□□□ -1.57
VRK3-220ENST00000600259 ARF1P84077 181 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms