RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 KTI12Q96EK9 354 aaPredicted RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 DUS3LQ96G46 650 aaKnown RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 ZNF347Q96SE7 839 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 CHID1Q9BWS9 393 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 CCM2LQ9NUG4 571 aaPredicted RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 SH3BGRL2Q9UJC5 107 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 A0A1W2PRQ8 180 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 CD8B2A6NJW9 211 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 LIPT2A6NK58 231 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 ANKRD65E5RJM6 399 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 FZD7O75084 574 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 PMS2P2O95744 297 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 H1F0P07305 194 aaKnown RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 RBM34P42696 430 aaKnown RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 UGT2B15P54855 530 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 CARD18P57730 90 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 RAC3P60763 192 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 DGCR6Q14129 220 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 PDSS1Q5T2R2 415 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 NSUN5P2Q63ZY6 315 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 TTC33Q6PID6 262 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 C5orf46Q6UWT4 87 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 RPTNQ6XPR3 784 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 TAAR8Q969N4 342 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 POM121Q96HA1 1249 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 RSRC1Q96IZ7 334 aaKnown RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 DMRTA2Q96SC8 542 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 FUZQ9BT04 418 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 ANKRD19PQ9H560 264 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 MEPEQ9NQ76 525 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 PAQR5Q9NXK6 330 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-205ENST00000600117 TRAPPC4Q9Y296 219 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 ZNF175Q9Y473 711 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 TESMINQ9Y4I5 508 aa16.86■□□□□ 0.29
CCDC9-205ENST00000600117 CACNA1CQ13936 2221 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 TRAV36DV7A0A075B6V5 113 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 FTCDNL1E5RQL4 147 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 E9PLN8 166 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 SULT2B1O00204 365 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 FKBP6O75344 327 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 AHSA1O95433 338 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 TGM6O95932 706 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 HOXB6P17509 224 aaKnown RBP16.85■□□□□ 0.29
CCDC9-205ENST00000600117 KLK2P20151 261 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 IDUAP35475 653 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 CASP6P55212 293 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 LSM11P83369 360 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCDC9-205ENST00000600117 FOXD4Q12950 439 aaPredicted RBP16.85■□□□□ 0.29
CCDC9-205ENST00000600117 SF3B4Q15427 424 aaKnown RBP eCLIP16.85■□□□□ 0.295e-8■■■■■ 38.9
CCDC9-205ENST00000600117 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
CCDC9-205ENST00000600117 MARVELD2Q8N4S9 558 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 OR6S1Q8NH40 331 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 TMEM239Q8WW34 195 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 HS6ST2Q96MM7 605 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 TRIB1Q96RU8 372 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 VKORC1Q9BQB6 163 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 SLC19A3Q9BZV2 496 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 DENND2DQ9H6A0 471 aaPredicted RBP16.85■□□□□ 0.29
CCDC9-205ENST00000600117 CALHM2Q9HA72 323 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 VNN3Q9NY84 501 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 MEMO1Q9Y316 297 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 ARHGAP21Q5T5U3 1957 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 FBN3Q75N90 2809 aa16.85■□□□□ 0.29
CCDC9-205ENST00000600117 PHF3Q92576 2039 aaKnown RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 A0A087WUU8 490 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 MBD3L4A6NDZ8 208 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 MBD3L3A6NE82 208 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 MBD3L5A6NJ08 208 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 DNPH1O43598 174 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 BGLAPP02818 100 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 RRM2P31350 389 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 RPS5P46782 204 aaKnown RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 OR2B6P58173 313 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 CSNK2A1P68400 391 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 SPIBQ01892 262 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 LTBQ06643 244 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 PON3Q15166 354 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 SGCBQ16585 318 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 B3GNT6Q6ZMB0 384 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 NCCRP1Q6ZVX7 275 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 CHMP1BQ7LBR1 199 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 ZNF808Q8N4W9 903 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 PFN4Q8NHR9 129 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 MFSD8Q8NHS3 518 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 MBD3L2Q8NHZ7 208 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 FNDC9Q8TBE3 224 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 SLC7A13Q8TCU3 470 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 ACOT11Q8WXI4 607 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 CPNE4Q96A23 557 aaPredicted RBP16.84■□□□□ 0.29
CCDC9-205ENST00000600117 EPYCQ99645 322 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 TTYH2Q9BSA4 534 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 TIGARQ9NQ88 270 aa16.84■□□□□ 0.29
CCDC9-205ENST00000600117 TRBV4-1A0A0J9YWV2 114 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
CCDC9-205ENST00000600117 PIP5K1CO60331 668 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 AQP8O94778 261 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 TOXO94900 526 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 GADD45GO95257 159 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 IGF2P01344 180 aa16.83■□□□□ 0.28
CCDC9-205ENST00000600117 GLI4P10075 376 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms