RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 NANSQ9NR45 359 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 HAO2Q9NYQ3 351 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 RARRES3Q9UL19 164 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 GRIP1Q9Y3R0 1128 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TEX13CA0A0J9YWL9 993 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 B4DXG7 233 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 J3QLW9 94 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 RNF13O43567 381 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 NUDT14O95848 222 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 ZNF19P17023 458 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
VRK3-217ENST00000599538 GRK6P43250 576 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 RPS5P46782 204 aaKnown RBP13.17□□□□□ -0.3
VRK3-217ENST00000599538 MADCAM1Q13477 382 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 ZNF385CQ66K41 422 aaPredicted RBP13.17□□□□□ -0.3
VRK3-217ENST00000599538 OR5M10Q6IEU7 315 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 NFAM1Q8NET5 270 aaPredicted RBP13.17□□□□□ -0.3
VRK3-217ENST00000599538 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 IFI44Q8TCB0 444 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 TSSK2Q96PF2 358 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 LPAR4Q99677 370 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 TBL1XR1Q9BZK7 514 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 ABCB9Q9NP78 766 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 TBCCD1Q9NVR7 557 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 C14orf119Q9NWQ9 140 aa13.17□□□□□ -0.3
VRK3-217ENST00000599538 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
VRK3-217ENST00000599538 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 FADS1O60427 444 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 HEXBP07686 556 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 PNLIPRP2P54317 469 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 LPAL2Q16609 132 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 PHF19Q5T6S3 580 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 FAM27D1Q5T7N8 215 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 ARL9Q6T311 187 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 OR5W2Q8NH69 310 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 TP53INP1Q96A56 240 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 C8orf44Q96CB5 159 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 CEP19Q96LK0 163 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 NPAS1Q99742 590 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 HIF3AQ9Y2N7 669 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 GSTK1Q9Y2Q3 226 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 V9GYH0 126 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 CASKO14936 926 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 ARPC3O15145 178 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 SELENOFO60613 162 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 HLA-DPB1P04440 258 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 EVI2BP34910 448 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 BCAP31P51572 246 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
VRK3-217ENST00000599538 ZNF79Q15937 498 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 TP53I3Q53FA7 332 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 OIT3Q8WWZ8 545 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 ATOH1Q92858 354 aaPredicted RBP13.16□□□□□ -0.3
VRK3-217ENST00000599538 WDR77Q9BQA1 342 aaPredicted RBP13.16□□□□□ -0.3
VRK3-217ENST00000599538 MED18Q9BUE0 208 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 COPS3Q9UNS2 423 aa13.16□□□□□ -0.3
VRK3-217ENST00000599538 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 TMEM200CA6NKL6 621 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 OR6C76A6NM76 312 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 ALOX12BO75342 701 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SPI1P17947 270 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 PYCR1P32322 319 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 FBXW4P57775 412 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 RAB15P59190 212 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 CTXN1P60606 82 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 PRPS1P60891 318 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 BDH1Q02338 343 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 VASH1Q7L8A9 365 aaPredicted RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 DUSP19Q8WTR2 217 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.3
VRK3-217ENST00000599538 NMNAT2Q9BZQ4 307 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 KLHL21Q9UJP4 597 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 CMAHPQ9Y471 501 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SAGE2PA6NJ88 616 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 H7C1C5 153 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 DCTN6O00399 190 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SNX4O95219 450 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 MT-ND5P03915 603 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 SPNP16150 400 aa13.15□□□□□ -0.3
VRK3-217ENST00000599538 AZGP1P25311 298 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms