RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TPST1O60507 370 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 FZD7O75084 574 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 AKR7A3O95154 331 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 IGHV3-9P01782 118 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 PNMTP11086 282 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 P2RY4P51582 365 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 HOXC5Q00444 222 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 RBBP4Q09028 425 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 FAPQ12884 760 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 GABRA6Q16445 453 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM225Q6GV28 225 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 C5orf46Q6UWT4 87 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 CASP12Q6UXS9 341 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 RETREG3Q86VR2 466 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 P3H2Q8IVL5 708 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 HIPK4Q8NE63 616 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 OR9K2Q8NGE7 335 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.93
CCDC9-203ENST00000596938 AKAP1Q92667 903 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC9-203ENST00000596938 BOD1Q96IK1 185 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 ANKRD27Q96NW4 1050 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 TRIM2Q9C040 744 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 SLC7A10Q9NS82 523 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF701Q9NV72 531 aaPredicted RBP9.27□□□□□ -0.93
CCDC9-203ENST00000596938 RASD1Q9Y272 281 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 RNF115Q9Y4L5 304 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 HEATR5AQ86XA9 2040 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 ELOA3DA6NLF2 546 aaPredicted RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 CCT8L1PA6NM43 557 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 FTCDNL1E5RQL4 147 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 FRS3O43559 492 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 OR2T1O43869 369 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 MFN2O95140 757 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 AHSA1O95433 338 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 C8BP07358 591 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 PCBP3P57721 371 aaKnown RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 TGFBR3Q03167 851 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 EGR4Q05215 589 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 BSPH1Q075Z2 132 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 STK11Q15831 433 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ELOA3BQ3SY89 546 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF672Q499Z4 452 aaPredicted RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 TSPO2Q5TGU0 170 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 FAM91A1Q658Y4 838 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ULK3Q6PHR2 472 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 CREB3L2Q70SY1 520 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 AAED1Q7RTV5 226 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 NET1Q7Z628 596 aaPredicted RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 DHDDSQ86SQ9 333 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 COMTD1Q86VU5 262 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 PTOV1Q86YD1 416 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ARMC8Q8IUR7 673 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 SLC30A8Q8IWU4 369 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 POMGNT2Q8NAT1 580 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 C11orf65Q8NCR3 313 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 C1orf162Q8NEQ5 155 aaPredicted RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ELOA3Q8NG57 546 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 OR52E4Q8NGH9 312 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM171Q8WVE6 324 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 SLC38A4Q969I6 547 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 RADILQ96JH8 1075 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 CGREF1Q99674 301 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 PTDSS2Q9BVG9 487 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 AMBRA1Q9C0C7 1298 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 CXorf56Q9H5V9 222 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 KAT8Q9H7Z6 458 aaKnown RBP9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF446Q9NWS9 450 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 ADPRHL2Q9NX46 363 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 UPB1Q9UBR1 384 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 RPS6KB2Q9UBS0 482 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 SLC25A15Q9Y619 301 aa9.26□□□□□ -0.93
CCDC9-203ENST00000596938 LOC102725191A0A1B0GVB3 256 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 A0A1B0GWA3 101 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 OR6C65A6NJZ3 312 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 M0QX08 132 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 OVOL3O00110 214 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 CLOCKO15516 846 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 FMO6PO60774 539 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 RAD51DO75771 328 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 NPPAP01160 153 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 ITGA5P08648 1049 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 DANCRP0C864 163 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 TROVE2P10155 538 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 PTAFRP25105 342 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 HTR2AP28223 471 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 MPGP29372 298 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 FOXG1P55316 489 aaPredicted RBP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 DMTNQ08495 405 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 GLIPR1L2Q4G1C9 344 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 ALG10BQ5I7T1 473 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 Q5PR19 223 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 GPAT4Q86UL3 456 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 EPHX4Q8IUS5 362 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 C17orf78Q8N4C9 275 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 WDR31Q8NA23 367 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 OR6S1Q8NH40 331 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 SMAP2Q8WU79 429 aaPredicted RBP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 FBXW5Q969U6 566 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 KTI12Q96EK9 354 aaPredicted RBP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 SLC47A1Q96FL8 570 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms