RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 KLHL4Q9C0H6 718 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 POLR2J2Q9GZM3 115 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 POLR2J3Q9H1A7 115 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 ADA2Q9NZK5 511 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 ABCD2Q9UBJ2 740 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 ING1Q9UK53 422 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 GPR52Q9Y2T5 361 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 SH3D21A4FU49 640 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 TRAPPC13A5PLN9 417 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 AQP7P3A6NL99 342 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CPSF4LA6NMK7 179 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF716A6NP11 495 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CXCR6O00574 342 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CHP2O43745 196 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 MRPL33O75394 65 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 AKR7A3O95154 331 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CNOT4O95628 575 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 KLK2P20151 261 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 IFNA8P32881 189 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 GSK3BP49841 420 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CDH12P55289 794 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 SELENOWP63302 87 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 EGR4Q05215 589 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 KRT72Q14CN4 511 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 P2RY6Q15077 328 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 FAM69AQ5T7M9 428 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 C16orf89Q6UX73 402 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CARM1Q86X55 608 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 TMEM99Q8N816 258 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF775Q96BV0 537 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 MPP4Q96JB8 637 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 USB1Q9BQ65 265 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 WFDC6Q9BQY6 131 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 TMEM43Q9BTV4 400 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 PCDHAC1Q9H158 963 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 OR10A4Q9H209 315 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF226Q9NYT6 803 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 C6orf203Q9P0P8 240 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 RASD1Q9Y272 281 aa15.35■□□□□ 0.05
SHKBP1-212ENST00000596163 CRYBA2P53672 197 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 MXRA7P84157 204 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 SLC17A1Q14916 467 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 NPTX1Q15818 432 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 RBM45Q8IUH3 476 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 STEAP2Q8NFT2 490 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 ADAMTS16Q8TE57 1224 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 APH1AQ96BI3 265 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 KTI12Q96EK9 354 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 TPD52L3Q96J77 140 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 MED18Q9BUE0 208 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 ARL8BQ9NVJ2 186 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 PKDREJQ9NTG1 2253 aa15.34■□□□□ 0.05
SHKBP1-212ENST00000596163 A6NNC1 897 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 PSMB1P20618 241 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 FBXW10Q5XX13 1052 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 LINC00114Q6XXX2 140 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 Q6ZT83 130 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 TMEM200AQ86VY9 491 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 OR4D11Q8NGI4 311 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 TAAR8Q969N4 342 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 FAM162AQ96A26 154 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 NSL1Q96IY1 281 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 PTDSS2Q9BVG9 487 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 TESMINQ9Y4I5 508 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 CORINQ9Y5Q5 1042 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 FLVCR1Q9Y5Y0 555 aa15.33■□□□□ 0.04
SHKBP1-212ENST00000596163 IGKV1D-42A0A075B6H8 117 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF814B7Z6K7 855 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 FTCDNL1E5RQL4 147 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 RAMP1O60894 148 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 ADAP00813 363 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 THRBP10828 461 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 IL32P24001 234 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 TAS2R41P59536 307 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 ITGADQ13349 1161 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 SAMD4BQ5PRF9 694 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 FBXW9Q5XUX1 488 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 STAC2Q6ZMT1 411 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 DEF8Q6ZN54 512 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 GPAT4Q86UL3 456 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 GABRG1Q8N1C3 465 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 UBE2J2Q8N2K1 259 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 FITM2Q8N6M3 262 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 C10orf53Q8N6V4 93 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 OR9K2Q8NGE7 335 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 TMEM45BQ96B21 275 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 WFIKKN1Q96NZ8 548 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 ASPNQ9BXN1 380 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 SLC19A3Q9BZV2 496 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 RPS6KA6Q9UK32 745 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 SLC7A7Q9UM01 511 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 B3GALT5Q9Y2C3 310 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 CENPEQ02224 2701 aa15.32■□□□□ 0.04
SHKBP1-212ENST00000596163 FZD7O75084 574 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 CTAG2O75638 210 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms