RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 CDC42EP2O14613 210 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 OR2T1O43869 369 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZIC3O60481 467 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 PTP4A3O75365 173 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 CLIC3O95833 236 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 IGFBP1P08833 259 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 MYF6P23409 242 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 GDF1P27539 372 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 RPS5P46782 204 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 GIPRP48546 466 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC9A3P48764 834 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 MEOX1P50221 254 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 TNFSF10P50591 281 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 EGR4Q05215 589 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 FOXO1Q12778 655 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 GINS1Q14691 196 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 PDK3Q15120 406 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF74Q16587 644 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZBED5Q49AG3 693 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 C1orf140Q5VVS0 124 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 RPL13AP3Q6NVV1 102 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 Q6ZPB1 254 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 YRDCQ86U90 279 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 KIF18BQ86Y91 864 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 DEPDC4Q8N2C3 294 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 GTPBP8Q8N3Z3 284 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 MARVELD2Q8N4S9 558 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 CLDN22Q8N7P3 220 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 FAM98AQ8NCA5 519 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 OR51A7Q8NH64 312 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 TAAR8Q969N4 342 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC25A36Q96CQ1 311 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 KTI12Q96EK9 354 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 HRASLS5Q96KN8 279 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF570Q96NI8 536 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 TNFRSF13CQ96RJ3 184 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 NPAS1Q99742 590 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 PIGQQ9BRB3 760 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 TSSK6Q9BXA6 273 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 NANSQ9NR45 359 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 NDRG4Q9ULP0 352 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 CDH10Q9Y6N8 788 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 NF1P21359 2839 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZFHX3Q15911 3703 aa11.79□□□□□ -0.52
SHKBP1-209ENST00000595803 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 ZAR1LA6NP61 321 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 EFNA2O43921 213 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 AGFG2O95081 481 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 TP53P04637 393 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 RFPL3SP0C7P2 107 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 EPHA2P29317 976 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 GGT2P36268 569 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 SMSP52788 366 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 NUP107P57740 925 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 CDK5Q00535 292 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 IL5RAQ01344 420 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 LTBQ06643 244 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 SELENBP1Q13228 472 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF691Q5VV52 312 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 C1QL3Q5VWW1 255 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 TMEM236Q5W0B7 351 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 CASP12Q6UXS9 341 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 USP51Q70EK9 711 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 MAMDC2Q7Z304 686 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 THAP5Q7Z6K1 395 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 LSRQ86X29 649 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 CHERPQ8IWX8 916 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 OR52L1Q8NGH7 329 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 SLC25A43Q8WUT9 341 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 LIPHQ8WWY8 451 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 MIB2Q96AX9 1013 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 SAMD8Q96LT4 415 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 PITX2Q99697 317 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 TAPBPLQ9BX59 468 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 OR2B2Q9GZK3 357 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 NDEL1Q9GZM8 345 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 IL20Q9NYY1 176 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 PCDHGA9Q9Y5G4 932 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 HSPE1-MOB4S4R3N1 261 aa11.78□□□□□ -0.52
SHKBP1-209ENST00000595803 TRAV27A0A087WT01 109 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 A1L4Q6 167 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 OR2M5A3KFT3 312 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 LRRN3E7EW58 273 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 NPIPB7O75200 414 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 OR6A2O95222 327 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 MT-ATP6P00846 226 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 BGLAPP02818 100 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 HMGN1P05114 100 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms