RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GOSR1O95249 250 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 LYPD3O95274 346 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ADAP00813 363 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 THY1P04216 161 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 GPIP06744 558 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 C8BP07358 591 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 DNAJA1P31689 397 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 OR1Q1Q15612 314 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 OTUD3Q5T2D3 398 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 SFRP5Q5T4F7 317 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 FAM91A1Q658Y4 838 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 C8orf82Q6P1X6 216 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ULK3Q6PHR2 472 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 SEZ6L2Q6UXD5 910 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 Q6ZT83 130 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 PATL1Q86TB9 770 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 P3H2Q8IVL5 708 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ZIC4Q8N9L1 334 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 PCYOX1LQ8NBM8 494 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC38A4Q969I6 547 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 HS3ST6Q96QI5 342 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 SH3GL1Q99961 368 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ECSITQ9BQ95 431 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 TRIM2Q9C040 744 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ACTR6Q9GZN1 396 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 ADPRHL2Q9NX46 363 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 EMC3Q9P0I2 261 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 SEC14L4Q9UDX3 406 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 GPR52Q9Y2T5 361 aa9.72□□□□□ -0.85
SHKBP1-206ENST00000595523 GMNCA6NCL1 334 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 ELOA3DA6NLF2 546 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 FAM220BPB1ANY3 271 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 GPR171O14626 319 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 AIM2O14862 343 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 KLF4O43474 513 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 FMO6PO60774 539 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 COX5AP20674 150 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 PTNP21246 168 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 IGHV1-2P23083 117 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 CDH12P55289 794 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 GNGT1P63211 74 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 VEZF1Q14119 521 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 P2RY6Q15077 328 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 ELOA3BQ3SY89 546 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 ALG10BQ5I7T1 473 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 INTS11Q5TA45 600 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 WDR88Q6ZMY6 472 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC15A3Q8IY34 581 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 ELOA3Q8NG57 546 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 OR9K2Q8NGE7 335 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 MFSD8Q8NHS3 518 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 DNAJA4Q8WW22 397 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 TAAR8Q969N4 342 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 MCHR1Q99705 422 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 NAA11Q9BSU3 229 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 OR10A4Q9H209 315 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 GID8Q9NWU2 228 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF226Q9NYT6 803 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 RPS6KB2Q9UBS0 482 aa9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 NOSIPQ9Y314 301 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-206ENST00000595523 USF3Q68DE3 2245 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 A0A087WUJ7 227 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PDLIM1O00151 329 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 NME4O00746 187 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 CASKO14936 926 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 LYZL6O75951 148 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 AHSA1O95433 338 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 CNOT4O95628 575 aaKnown RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PNMTP11086 282 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PPP3CBP16298 524 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TNFRSF1BP20333 461 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 FOXG1P55316 489 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 NCALDP61601 193 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 LTBQ06643 244 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ITGADQ13349 1161 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TESK1Q15569 626 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TAB1Q15750 504 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ENTPD8Q5MY95 495 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 FBXW9Q5XUX1 488 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ERICH5Q6P6B1 374 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 BHLHA15Q7RTS1 189 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PIGWQ7Z7B1 504 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 RANBP3LQ86VV4 465 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 LURAP1LQ8IV03 231 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF100Q8IYN0 542 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 OR2T12Q8NG77 320 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 VANGL1Q8TAA9 524 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 KISS1RQ969F8 398 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM45BQ96B21 275 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 APH1AQ96BI3 265 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC25A36Q96CQ1 311 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PIK3IP1Q96FE7 263 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC47A1Q96FL8 570 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms