RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OTUB1Q96FW1 271 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 SIGLEC11Q96RL6 698 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TIMP4Q99727 224 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 NIPSNAP1Q9BPW8 284 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 WFDC6Q9BQY6 131 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 DUSP21Q9H596 190 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 EVA1AQ9H8M9 152 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 ANKRA2Q9H9E1 313 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF556Q9HAH1 456 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 EQTNQ9NQ60 294 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 PLCXD1Q9NUJ7 323 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 BOKQ9UMX3 212 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 MRPS33Q9Y291 106 aaKnown RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 IFT52Q9Y366 437 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 MMACHCQ9Y4U1 282 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CLDN16Q9Y5I7 305 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 SH3PXD2BA1X283 911 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DEFB108AA8MXU0 73 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CTNSO60931 367 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 UGT2B17O75795 530 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 NKX2-2O95096 273 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 ALOX5P09917 674 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 NT5EP21589 574 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 FUT4P22083 530 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 EPHA2P29317 976 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 SLC35A2P78381 396 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 HPCAP84074 193 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 IL1RL1Q01638 556 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 RUNX1T1Q06455 604 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 BIKQ13323 160 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 TRMT12Q53H54 448 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF311Q5JNZ3 666 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DCST1Q5T197 706 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 SLC22A10Q63ZE4 541 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 XAF1Q6GPH4 301 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 OPN5Q6U736 354 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CD300LDQ6UXZ3 194 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DEF8Q6ZN54 512 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 KCTD8Q6ZWB6 473 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 RBM45Q8IUH3 476 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 ENTHD1Q8IYW4 607 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 SPARTQ8N0X7 666 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DEPDC4Q8N2C3 294 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 OR6T1Q8NGN1 323 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 VANGL1Q8TAA9 524 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF420Q8TAQ5 688 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CNIH3Q8TBE1 160 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 APH1BQ8WW43 257 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CDS1Q92903 461 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 TMIGD2Q96BF3 282 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 SDF2Q99470 211 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DOK1Q99704 481 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 LMF2Q9BU23 707 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 POLR2J2Q9GZM3 115 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 POLR2J3Q9H1A7 115 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 VCX3AQ9NNX9 186 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 ZFP64Q9NPA5 681 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CCNB1IP1Q9NPC3 277 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 QPCTLQ9NXS2 382 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
SCAF1-202ENST00000595242 TMCC3Q9ULS5 477 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 TPRKBQ9Y3C4 175 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 CHST2Q9Y4C5 530 aa11.54□□□□□ -0.56
SCAF1-202ENST00000595242 DYSFO75923 2080 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 ZAR1LA6NP61 321 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 H3BSA7 217 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 M0R3H8 397 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 AHCYL1O43865 530 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 KIAA0513O60268 411 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 SEC14L2O76054 403 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 CBX7O95931 251 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 CT62P0C5K7 136 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 PAX1P15863 534 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 GABRB1P18505 474 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 S1PR1P21453 382 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 GSTT1P30711 240 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 HSD17B7P56937 341 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 RNF4P78317 190 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 ID2Q02363 134 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 FOXF2Q12947 444 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 SLC13A2Q13183 592 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 RAB39AQ14964 217 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 SEC23BQ15437 767 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 EIPR1Q53HC9 387 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 GTF2IRD2BQ6EKJ0 949 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 KLHL17Q6TDP4 642 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms