RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CTNSO60931 367 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PIAS2O75928 621 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 NSA2O95478 260 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PAHP00439 452 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 SULT1A3P0DMM9 295 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 SULT1A4P0DMN0 295 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PEPDP12955 493 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 FOSL2P15408 326 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 RPS4Y1P22090 263 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 GABRA4P48169 554 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 RAG2P55895 527 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 WNT4P56705 351 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 RPS25P62851 125 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PSG6Q00889 435 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 DMWDQ09019 674 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 SYT14P1Q58G82 188 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PAQR6Q6TCH4 344 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 ACOT12Q8WYK0 555 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 CHRDQ9H2X0 955 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 DPAGT1Q9H3H5 408 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 DLL4Q9NR61 685 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PCDH15Q96QU1 1955 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 ASXL3Q9C0F0 2248 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 CLDN4O14493 209 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 NKX2-2O95096 273 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 CXCL3P19876 107 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 EMDP50402 254 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 CTBP2P56545 445 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 FAM53BQ14153 422 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 RGS7BPQ6MZT1 257 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC30A6Q6NXT4 461 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 MBOAT2Q6ZWT7 520 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 SYT14Q8NB59 555 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 CLRN3Q8NCR9 226 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 RFT1Q96AA3 541 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 ZDHHC12Q96GR4 267 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 DGAT2Q96PD7 388 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 NPTNQ9Y639 398 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 CACNG2Q9Y698 323 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 APOL3O95236 402 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 OR1Q1Q15612 314 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNHIT3Q15649 155 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 RASSF6Q6ZTQ3 369 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF595Q8IYB9 648 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 FAM26EQ8N5C1 309 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 OR51Q1Q8NH59 317 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 OTULINQ96BN8 352 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 SENP5Q96HI0 755 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF582Q96NG8 517 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 ABCG5Q9H222 651 aa15.68■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM129A0AVI4 362 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 SYNDIG1LA6NDD5 238 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 CDC42EP2O14613 210 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 GPR171O14626 319 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 BCAT2O15382 392 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 GMDSO60547 372 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 ADAM11O75078 769 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 AK1P00568 194 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 FPR3P25089 353 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 BTCP35070 178 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 CXCL12P48061 93 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 AFF3P51826 1226 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 CAV3P56539 151 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 GPR85P60893 370 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC25A30Q5SVS4 291 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 OGFOD3Q6PK18 319 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 WDR88Q6ZMY6 472 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 FGD2Q7Z6J4 655 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 OR52I1Q8NGK6 324 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 COPZ2Q9P299 210 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 TEX13CA0A0J9YWL9 993 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 A0A1B0GVT2 93 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 SMIM30A4D0T7 59 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 TRAPPC13A5PLN9 417 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 IGKV1D-16P01601 117 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 FUT1P19526 365 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 PLAURQ03405 335 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 NTRK2Q16620 822 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 TTLL10Q6ZVT0 673 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 PFN4Q8NHR9 129 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 GRHL3Q8TE85 626 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 ATOH1Q92858 354 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF285Q96NJ3 590 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC38A2Q96QD8 506 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 SECISBP2Q96T21 854 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 NPAS1Q99742 590 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 PRSS27Q9BQR3 290 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 THAP7Q9BT49 309 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 NUDT15Q9NV35 164 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 HPF1Q9NWY4 346 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 TESQ9UGI8 421 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 ERVK-19Q9WJR5 959 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 YARS2Q9Y2Z4 477 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 CLDN16Q9Y5I7 305 aa15.67■□□□□ 0.1
SHKBP1-205ENST00000594973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 IRGMA1A4Y4 181 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 PRKNO60260 465 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 CD1CP29017 333 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 ETV5P41161 510 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms