RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 ZNF776Q68DI1 518 aaPredicted RBP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 OR52W1Q6IF63 320 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 PPP1R2P3Q6NXS1 205 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TMEM64Q6YI46 380 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 Q6YL49 198 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 DPY19L2P2Q6ZN68 376 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 C17orf107Q6ZR85 190 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 LCNL1Q6ZST4 164 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 NIPA1Q7RTP0 329 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 COX8CQ7Z4L0 72 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 SNX20Q7Z614 316 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 GPBP1Q86WP2 473 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CACUL1Q86Y37 369 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 PTOV1Q86YD1 416 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 PLCZ1Q86YW0 608 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TMEM139Q8IV31 216 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TEX26Q8N6G2 289 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 ZNF781Q8N8C0 355 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 LRTM2Q8N967 370 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 GATSQ8NAP1 163 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CCDC197Q8NCU1 140 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 FBXO36Q8NEA4 188 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 FBXL13Q8NEE6 735 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 OR4D6Q8NGJ1 314 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 SPATA22Q8NHS9 363 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CCDC26Q8TAB7 109 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 UBA3Q8TBC4 463 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 SLC38A5Q8WUX1 472 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TANKQ92844 425 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CHMP6Q96FZ7 201 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 C8orf49Q96NF6 230 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MAP3K3Q99759 626 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CNPY3Q9BT09 278 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MCRIP2Q9BUT9 160 aaKnown RBP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MIS12Q9H081 205 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 RANBP3Q9H6Z4 567 aaPredicted RBP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 RNF121Q9H920 327 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 CLK4Q9HAZ1 481 aaKnown RBP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TXLNGQ9NUQ3 528 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 ZNF701Q9NV72 531 aaPredicted RBP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MED17Q9NVC6 651 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 NKIRAS1Q9NYS0 192 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 DDX19BQ9UMR2 479 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 SCML1Q9UN30 329 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 FLVCR2Q9UPI3 526 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 STARD10Q9Y365 291 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 TSC22D4Q9Y3Q8 395 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 YIPF1Q9Y548 306 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MAD1L1Q9Y6D9 718 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 COLEC10Q9Y6Z7 277 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 MGAM2Q2M2H8 2515 aa3.7□□□□□ -1.82
LINC00649-204ENST00000593977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC00649-204ENST00000593977 IGKV6-21A0A0C4DH24 114 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 IQANK1A0A1B0GTG1 560 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 A0A1B0GVT2 93 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 A0A1W2PNU3 283 aaPredicted RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 GRID2IPA4D2P6 1211 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 C1QTNF3-AMACRE9PGA6 284 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 TULP2O00295 520 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 ITGB1BP1O14713 200 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 WNT9BO14905 357 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SIVA1O15304 175 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 MLNRO43193 412 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CDC123O75794 336 aaPredicted RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 RBBP9O75884 186 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 OR2J3O76001 311 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 B3GAT3O94766 335 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SCELO95171 688 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 BMP10O95393 424 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 BRI3O95415 125 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 LDOC1O95751 146 aaPredicted RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CCNE2O96020 404 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SERPIND1P05546 499 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 FCER2P06734 321 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 MMP11P24347 488 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 AHRP35869 848 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CRYBB2P43320 205 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 MAGEA5P43359 124 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SGSHP51688 502 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 UBE2G2P60604 165 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CX3CL1P78423 397 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 OC90Q02509 493 aaPredicted RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SRYQ05066 204 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 ST3GAL1Q11201 340 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 ELAVL2Q12926 359 aaKnown RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 SRSF6Q13247 344 aaKnown RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 HNF4GQ14541 408 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 MESDQ14696 234 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CHI3L2Q15782 390 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 ZSCAN26Q16670 478 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 KYAT1Q16773 422 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 PAPPA-AS1Q5QFB9 102 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 OTUD3Q5T2D3 398 aaPredicted RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 ASPHD1Q5U4P2 390 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 CWC27Q6UX04 472 aaKnown RBP3.69□□□□□ -1.82
LINC00649-204ENST00000593977 TMIGD1Q6UXZ0 262 aa3.69□□□□□ -1.82
LINC00649-204ENST00000593977 LINGO4Q6UY18 593 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms