RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GABRA1P14867 456 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 MAGEA2P43356 314 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 IST1P53990 364 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 SKP2Q13309 424 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 RPS26P11Q5JNZ5 115 aaPredicted RBP17.71■□□□□ 0.43
LSM4-203ENST00000593829 TMEM53Q6P2H8 277 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 CMIPQ8IY22 773 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 OR5W2Q8NH69 310 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 BBS10Q8TAM1 723 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 SSC4DQ8WTU2 575 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 CAMK2AQ9UQM7 478 aa17.71■□□□□ 0.43
LSM4-203ENST00000593829 OR2M5A3KFT3 312 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 M0R3G1 203 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 ZNF17P17021 662 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 LHX2P50458 406 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CCR4P51679 360 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 SLC35A2P78381 396 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CDK6Q00534 326 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 IFITM3Q01628 133 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CBFBQ13951 182 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 PLPPR5Q32ZL2 321 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 SHQ1Q6PI26 577 aaKnown RBP17.7■□□□□ 0.42
LSM4-203ENST00000593829 SVOPQ8N4V2 548 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 FAM71CQ8NEG0 241 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 OR5M1Q8NGP8 315 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 OR52P1PQ8NH57 321 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 NFKBIDQ8NI38 313 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 GPR119Q8TDV5 335 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 FAM162AQ96A26 154 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 WDYHV1Q96HA8 205 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CCDC120Q96HB5 630 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 KLHDC3Q9BQ90 382 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 KAT8Q9H7Z6 458 aaKnown RBP17.7■□□□□ 0.42
LSM4-203ENST00000593829 CACYBPQ9HB71 228 aaKnown RBP17.7■□□□□ 0.42
LSM4-203ENST00000593829 CCNB1IP1Q9NPC3 277 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 ISPDA4D126 451 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CLDN24A6NM45 220 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 AHRRA9YTQ3 701 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 BMP4P12644 408 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 NID1P14543 1247 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 CPN1P15169 458 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 FUT4P22083 530 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 PTGER4P35408 488 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 STARP49675 285 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 PIGFQ07326 219 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 TMEM44Q2T9K0 475 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 REEP3Q6NUK4 255 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 P2RY8Q86VZ1 359 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 HS3ST5Q8IZT8 346 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 GTPBP8Q8N3Z3 284 aaPredicted RBP17.7■□□□□ 0.42
LSM4-203ENST00000593829 OR10A6Q8NH74 314 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 ARSGQ96EG1 525 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 DMRTA2Q96SC8 542 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 SP140LQ9H930 580 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 ZNF337Q9Y3M9 751 aa17.7■□□□□ 0.42
LSM4-203ENST00000593829 WIPF3A6NGB9 483 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 CD40LGP29965 261 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 EIF1P41567 113 aaKnown RBP17.69■□□□□ 0.42
LSM4-203ENST00000593829 GZMMP51124 257 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 SCARB2Q14108 478 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 SF3B4Q15427 424 aaKnown RBP eCLIP17.69■□□□□ 0.42
LSM4-203ENST00000593829 TMEM211Q6ICI0 200 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 TMEM179BQ7Z7N9 219 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 EXOSC3Q9NQT5 275 aaKnown RBP17.69■□□□□ 0.42
LSM4-203ENST00000593829 ZNF232Q9UNY5 417 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 IFT52Q9Y366 437 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 PCNX3Q9H6A9 2034 aa17.69■□□□□ 0.42
LSM4-203ENST00000593829 SHISA8B8ZZ34 492 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 PEPDP12955 493 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 POU3F2P20265 443 aaPredicted RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 PPP5CP53041 499 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 RBBP4Q09028 425 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 LARS2Q15031 903 aaKnown RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 C1orf185Q5T7R7 199 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 SERPINA11Q86U17 422 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 C11orf65Q8NCR3 313 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 SCN3BQ9NY72 215 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 PMF1-BGLAPU3KQ54 211 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 PTGES3LE9PB15 166 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 THBS1P07996 1170 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 ZNF708P17019 499 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 CLDN18P56856 261 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 SRYQ05066 204 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 TOMM34Q15785 309 aaPredicted RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 ZSWIM7Q19AV6 140 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 MRPL2Q5T653 305 aaKnown RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 RTL6Q6ICC9 239 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 ADCK1Q86TW2 530 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 VRK2Q86Y07 508 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 KRT73Q86Y46 540 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 PTOV1Q86YD1 416 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 CNOT9Q92600 299 aaKnown RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 PYURFQ96I23 114 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 DACH2Q96NX9 599 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 ZNF443Q9Y2A4 671 aaPredicted RBP17.68■□□□□ 0.42
LSM4-203ENST00000593829 FAM215AQ9Y5M1 114 aa17.68■□□□□ 0.42
LSM4-203ENST00000593829 H3BML4 177 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 ZG16O60844 167 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 PGCP20142 388 aa17.67■□□□□ 0.42
LSM4-203ENST00000593829 ADH6P28332 368 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms