RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 HIKESHIQ53FT3 197 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 SLC22A25Q6T423 547 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 PAQR6Q6TCH4 344 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 MSANTD1Q6ZTZ1 278 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 NFKBIDQ8NI38 313 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 ALKBH3Q96Q83 286 aaPredicted RBP11.11□□□□□ -0.63
RFX1-207ENST00000589937 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 AMBRA1Q9C0C7 1298 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 RMND5AQ9H871 391 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 SLC9A8Q9Y2E8 581 aa11.11□□□□□ -0.63
RFX1-207ENST00000589937 FAM171A2A8MVW0 826 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 CLIC1O00299 241 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 NCF2P19878 526 aaPredicted RBP11.1□□□□□ -0.63
RFX1-207ENST00000589937 CXCR1P25024 350 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 HTR2AP28223 471 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 SELENOPP49908 381 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 IDH3AP50213 366 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 TUBA1BP68363 451 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 TUBA4AP68366 448 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 PAGE3Q5JUK9 113 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 C1orf140Q5VVS0 124 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 WBP2NLQ6ICG8 309 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 TUBA1AQ71U36 451 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 ZNF440Q8IYI8 595 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 KDM8Q8N371 416 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 THOC1Q96FV9 657 aaKnown RBP11.1□□□□□ -0.63
RFX1-207ENST00000589937 WFDC6Q9BQY6 131 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
RFX1-207ENST00000589937 PTDSS2Q9BVG9 487 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 SPATA9Q9BWV2 254 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 CACNG6Q9BXT2 260 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 A4GALTQ9NPC4 353 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 TCF7L2Q9NQB0 619 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 SLC17A5Q9NRA2 495 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 B3GALT5Q9Y2C3 310 aa11.1□□□□□ -0.63
RFX1-207ENST00000589937 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
RFX1-207ENST00000589937 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 IGHV4-30-2A0A087WSY4 118 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 A0A096LPI6 279 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 EIF1BO60739 113 aaKnown RBP11.09□□□□□ -0.63
RFX1-207ENST00000589937 NPIPB7O75200 414 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 ERLIN1O75477 346 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 LY6HO94772 140 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 LGI1O95970 557 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 GPIP06744 558 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 UQCRBP14927 111 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 EGR4Q05215 589 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
RFX1-207ENST00000589937 ZNF311Q5JNZ3 666 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 AGBL2Q5U5Z8 902 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 TMEM108Q6UXF1 575 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 DNM1P46Q6ZS02 220 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 AAED1Q7RTV5 226 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 P2RY8Q86VZ1 359 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 PMM1Q92871 262 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 TMEM45BQ96B21 275 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 KTI12Q96EK9 354 aaPredicted RBP11.09□□□□□ -0.63
RFX1-207ENST00000589937 C7orf26Q96N11 449 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 MUS81Q96NY9 551 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
RFX1-207ENST00000589937 REG4Q9BYZ8 158 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 ALG2Q9H553 416 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 SLC52A3Q9NQ40 469 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 CALML5Q9NZT1 146 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 CCDC167Q9P0B6 97 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 VAPAQ9P0L0 249 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 UPB1Q9UBR1 384 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 DCTN4Q9UJW0 460 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 POU2F3Q9UKI9 436 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
RFX1-207ENST00000589937 A0A096LNT2 108 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 A0A0G2JPF8 293 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 A8MVM7 634 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 HNRNPCL2B2RXH8 293 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 HNRNPCL3B7ZW38 293 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 FTCDNL1E5RQL4 147 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 POLR3GO15318 223 aaPredicted RBP11.08□□□□□ -0.64
RFX1-207ENST00000589937 SSX4O60224 188 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 TPST1O60507 370 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 HNRNPCL1O60812 293 aaKnown RBP11.08□□□□□ -0.64
RFX1-207ENST00000589937 TMCC2O75069 709 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 UPK3AO75631 287 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 HNRNPCL4P0DMR1 293 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 ARAFP10398 606 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 PNMTP11086 282 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 BMP2P12643 396 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 CBLP22681 906 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 FKBP2P26885 142 aaKnown RBP11.08□□□□□ -0.64
RFX1-207ENST00000589937 AQP1P29972 269 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 RPS5P46782 204 aaKnown RBP11.08□□□□□ -0.64
RFX1-207ENST00000589937 AQP5P55064 265 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 STX1BP61266 288 aa11.08□□□□□ -0.64
RFX1-207ENST00000589937 PRAMEF8Q5VWM4 474 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms