RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZNF175Q9Y473 711 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 U3KQV3 271 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 CHD6Q8TD26 2715 aa12.21□□□□□ -0.46
VMP1-210ENST00000589823 CD8B2A6NJW9 211 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 SLC22A20A6NK97 555 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 H0YHG0 523 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 PIP5K1CO60331 668 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 OR10H3O60404 316 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 OR7A10O76100 309 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 CCNB2O95067 398 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 BGLAPP02818 100 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 HIST1H2ABP04908 130 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 STSP08842 583 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 FCGR2AP12318 317 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 CBLP22681 906 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 DNAJA1P31689 397 aaKnown RBP12.2□□□□□ -0.46
VMP1-210ENST00000589823 CA7P43166 264 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 LIMS1P48059 325 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 CTBP2P56545 445 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 PRKCDQ05655 676 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
VMP1-210ENST00000589823 SEC23BQ15437 767 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 NSUN5P2Q63ZY6 315 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 GTF2IRD2BQ6EKJ0 949 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 C3P1Q6ZMU1 363 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 HIST3H2AQ7L7L0 130 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 MAMDC2Q7Z304 686 aaPredicted RBP12.2□□□□□ -0.46
VMP1-210ENST00000589823 ADGRE4PQ86SQ3 457 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 GTF2IRD2Q86UP8 949 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 MCEMP1Q8IX19 187 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 OR4C15Q8NGM1 316 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 PRR7Q8TB68 274 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 FNDC9Q8TBE3 224 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 LRTOMTQ8WZ04 291 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 HIST1H2ACQ93077 130 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 BPIFA2Q96DR5 249 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 FUZQ9BT04 418 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 FKRPQ9H9S5 495 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 NANSQ9NR45 359 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 VNN3Q9NY84 501 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 CORINQ9Y5Q5 1042 aa12.2□□□□□ -0.46
VMP1-210ENST00000589823 IGHV3-15A0A0B4J1V0 119 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 FTCDNL1E5RQL4 147 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 E9PLN8 166 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 H3BNX3 289 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 AKR7A3O95154 331 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 GRPRP30550 384 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 UQCRFS1P47985 274 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 AGFG1P52594 562 aaKnown RBP12.19□□□□□ -0.46
VMP1-210ENST00000589823 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
VMP1-210ENST00000589823 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
VMP1-210ENST00000589823 ZNF74Q16587 644 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 MICAQ29983 383 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 EIF2S3LQ2VIR3 472 aaKnown RBP12.19□□□□□ -0.46
VMP1-210ENST00000589823 OTUD3Q5T2D3 398 aaPredicted RBP12.19□□□□□ -0.46
VMP1-210ENST00000589823 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 PAQR6Q6TCH4 344 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 FCRLAQ7L513 359 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 AMIGO2Q86SJ2 522 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 SLC43A2Q8N370 569 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 ROBO4Q8WZ75 1007 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 WNT2BQ93097 391 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 MOGAT1Q96PD6 335 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 TM9SF2Q99805 663 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 VKORC1Q9BQB6 163 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 CLCF1Q9UBD9 225 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 ZNF229Q9UJW7 825 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 FAM215AQ9Y5M1 114 aa12.19□□□□□ -0.46
VMP1-210ENST00000589823 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 EFCAB9A8MZ26 197 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 LRRN3E7EW58 273 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 M0R082 166 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 CCL21O00585 134 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 SMAD9O15198 467 aaKnown RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 SAGP10523 405 aaPredicted RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 FUT1P19526 365 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 GPR4P46093 362 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 IST1P53990 364 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 PER3P56645 1201 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 IL1RL1Q01638 556 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 LTBQ06643 244 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 PMS2P3Q13401 168 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 RNPS1Q15287 305 aaKnown RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 TMEM225Q6GV28 225 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 RTL6Q6ICC9 239 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 OR2A2Q6IF42 318 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 H1FNTQ75WM6 255 aaPredicted RBP12.18□□□□□ -0.46
VMP1-210ENST00000589823 SLC46A3Q7Z3Q1 461 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 TMEM99Q8N816 258 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 OR5J2Q8NH18 312 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 ZNF417Q8TAU3 575 aa12.18□□□□□ -0.46
VMP1-210ENST00000589823 GNPDA2Q8TDQ7 276 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms