RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 CYTIPO60759 359 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 CGAP01215 116 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 OPN1SWP03999 348 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 CPOXP36551 454 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 RGS8P57771 180 aaPredicted RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 NCALDP61601 193 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 HOXC5Q00444 222 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 SORDQ00796 357 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 VEZF1Q14119 521 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 CCDC80Q76M96 950 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 ARPINQ7Z6K5 226 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 LSMEM1Q8N8F7 131 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 SMYD1Q8NB12 490 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 OR52E4Q8NGH9 312 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 RASSF5Q8WWW0 418 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 TACO1Q9BSH4 297 aaKnown RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 OPN3Q9H1Y3 402 aaPredicted RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 TESQ9UGI8 421 aaKnown RBP12.9□□□□□ -0.34
RFX1-206ENST00000589760 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 AP3M1Q9Y2T2 418 aa12.9□□□□□ -0.34
RFX1-206ENST00000589760 A8MVM7 634 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 FAM220BPB1ANY3 271 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
RFX1-206ENST00000589760 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
RFX1-206ENST00000589760 LGI1O95970 557 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 FESP07332 822 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 C8BP07358 591 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 PRF1P14222 555 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 PRDX6P30041 224 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 AGTR1P30556 359 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 SSTR2P30874 369 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 KIR2DL3P43628 341 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 KCNJ5P48544 419 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 OR2B6P58173 313 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 SLC35A1P78382 337 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 DUSP7Q16829 419 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ZNF474Q6S9Z5 364 aaPredicted RBP12.89□□□□□ -0.35
RFX1-206ENST00000589760 COMTD1Q86VU5 262 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 RANBP3LQ86VV4 465 aaPredicted RBP12.89□□□□□ -0.35
RFX1-206ENST00000589760 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ZNF583Q96ND8 569 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 PSD2Q9BQI7 771 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ZNF559Q9BR84 538 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 GPATCH1Q9BRR8 931 aaKnown RBP12.89□□□□□ -0.35
RFX1-206ENST00000589760 TRIM2Q9C040 744 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 C12orf10Q9HB07 376 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ELOVL5Q9NYP7 299 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
RFX1-206ENST00000589760 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
RFX1-206ENST00000589760 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 YES1P07947 543 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 POU2F1P14859 743 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 IDUAP35475 653 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 CD79BP40259 229 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 PCYT1AP49585 367 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 NUDT2P50583 147 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 TLE4Q04727 773 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 BNIP2Q12982 314 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 HACD2Q6Y1H2 254 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
RFX1-206ENST00000589760 STK32CQ86UX6 486 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 OR2T12Q8NG77 320 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
RFX1-206ENST00000589760 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
RFX1-206ENST00000589760 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 FANCFQ9NPI8 374 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
RFX1-206ENST00000589760 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
RFX1-206ENST00000589760 ELOVL7A1L3X0 281 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
RFX1-206ENST00000589760 DCTN3O75935 186 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 GPIP06744 558 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 KLK2P20151 261 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 HTR2AP28223 471 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 FAM27E3Q08E93 113 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 PDK3Q15120 406 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 OR1Q1Q15612 314 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 NRF1Q16656 503 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 ALG10BQ5I7T1 473 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 FAM91A1Q658Y4 838 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 ABLIM2Q6H8Q1 611 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 ULK3Q6PHR2 472 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 BEND4Q6ZU67 534 aa12.87□□□□□ -0.35
RFX1-206ENST00000589760 NUFIP2Q7Z417 695 aaKnown RBP12.87□□□□□ -0.35
RFX1-206ENST00000589760 SLC15A3Q8IY34 581 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms