RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 C11orf65Q8NCR3 313 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 OR52E4Q8NGH9 312 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 TMEM45BQ96B21 275 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 SLC25A36Q96CQ1 311 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 PERPQ96FX8 193 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 ANKRD27Q96NW4 1050 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 MRGBPQ9NV56 204 aa17.25■□□□□ 0.35
TPM4-208ENST00000588410 ABCA4P78363 2273 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 VAMP5O95183 116 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
TPM4-208ENST00000588410 PNMTP11086 282 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 ARFIP2P53365 341 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 RGS8P57771 180 aaPredicted RBP17.24■□□□□ 0.35
TPM4-208ENST00000588410 MTPNP58546 118 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 BSPH1Q075Z2 132 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 RBBP4Q09028 425 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 ADRM1Q16186 407 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 Q5PR19 223 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 OR7E24Q6IFN5 339 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 RETREG3Q86VR2 466 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 LSMEM1Q8N8F7 131 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 MFSD8Q8NHS3 518 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 RNF217Q8TC41 542 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 DNAJA4Q8WW22 397 aaPredicted RBP17.24■□□□□ 0.35
TPM4-208ENST00000588410 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 PIF1Q9H611 641 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 C12orf10Q9HB07 376 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 TMEM27Q9HBJ8 222 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 RASD1Q9Y272 281 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 HEATR5AQ86XA9 2040 aa17.24■□□□□ 0.35
TPM4-208ENST00000588410 HRNRQ86YZ3 2850 aaPredicted RBP17.23■□□□□ 0.35
TPM4-208ENST00000588410 A0A1B0GWA3 101 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 TPST1O60507 370 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 NPIPB7O75200 414 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 KRT33AO76009 404 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 FOSL1P15407 271 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 RPS5P46782 204 aaKnown RBP17.23■□□□□ 0.35
TPM4-208ENST00000588410 TGFBR3Q03167 851 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 ALG10BQ5I7T1 473 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 TSPO2Q5TGU0 170 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 ADAM5Q6NVV9 412 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 C5orf46Q6UWT4 87 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 OR52N5Q8NH56 324 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 FBXW5Q969U6 566 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 EVA1AQ9H8M9 152 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 SLC7A10Q9NS82 523 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 FGFR1OP2Q9NVK5 253 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 ZNF446Q9NWS9 450 aa17.23■□□□□ 0.35
TPM4-208ENST00000588410 TESQ9UGI8 421 aaKnown RBP17.23■□□□□ 0.35
TPM4-208ENST00000588410 PRRC2AP48634 2157 aaKnown RBP17.23■□□□□ 0.35
TPM4-208ENST00000588410 CELSR1Q9NYQ6 3014 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 DPRXA6NFQ7 191 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 OR2T1O43869 369 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 TMCC2O75069 709 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 HTR2AP28223 471 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 SF3A3Q12874 501 aaKnown RBP eCLIP17.22■□□□□ 0.35
TPM4-208ENST00000588410 CYLC2Q14093 348 aaPredicted RBP17.22■□□□□ 0.35
TPM4-208ENST00000588410 GLIPR1L2Q4G1C9 344 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 C9orf135Q5VTT2 229 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 ULK3Q6PHR2 472 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 KLHL17Q6TDP4 642 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 C6orf89Q6UWU4 347 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 ABHD12BQ7Z5M8 362 aaPredicted RBP17.22■□□□□ 0.35
TPM4-208ENST00000588410 RANBP3LQ86VV4 465 aaPredicted RBP17.22■□□□□ 0.35
TPM4-208ENST00000588410 PTOV1Q86YD1 416 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 SLC30A8Q8IWU4 369 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 ZIC4Q8N9L1 334 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 POMGNT2Q8NAT1 580 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 SLC47A1Q96FL8 570 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 ZNF385AQ96PM9 386 aaKnown RBP17.22■□□□□ 0.35
TPM4-208ENST00000588410 SLCO5A1Q9H2Y9 848 aa17.22■□□□□ 0.35
TPM4-208ENST00000588410 MFN2O95140 757 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 ITGA5P08648 1049 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 DMTNQ08495 405 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 SELPLGQ14242 412 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 GABRA6Q16445 453 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 MMEL1Q495T6 779 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 ZNF672Q499Z4 452 aaPredicted RBP17.21■□□□□ 0.35
TPM4-208ENST00000588410 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 SEZ6L2Q6UXD5 910 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 TMEM108Q6UXF1 575 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 YTHDF3Q7Z739 585 aaKnown RBP17.21■□□□□ 0.35
TPM4-208ENST00000588410 COMTD1Q86VU5 262 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 KRTAP1-3Q8IUG1 177 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 SMYD1Q8NB12 490 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 KBTBD8Q8NFY9 601 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 KTI12Q96EK9 354 aaPredicted RBP17.21■□□□□ 0.35
TPM4-208ENST00000588410 MUS81Q96NY9 551 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 PTDSS2Q9BVG9 487 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 RSPO3Q9BXY4 272 aaPredicted RBP17.21■□□□□ 0.35
TPM4-208ENST00000588410 GSX2Q9BZM3 304 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 LAMP3Q9UQV4 416 aa17.21■□□□□ 0.35
TPM4-208ENST00000588410 TRAV36DV7A0A075B6V5 113 aa17.2■□□□□ 0.34
TPM4-208ENST00000588410 A0A1W2PR80 420 aa17.2■□□□□ 0.34
TPM4-208ENST00000588410 FTCDNL1E5RQL4 147 aa17.2■□□□□ 0.34
TPM4-208ENST00000588410 PDLIM1O00151 329 aa17.2■□□□□ 0.34
TPM4-208ENST00000588410 MPGP29372 298 aa17.2■□□□□ 0.34
TPM4-208ENST00000588410 PTH2RP49190 550 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms