RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MGAT4BQ9UQ53 548 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 FRS3O43559 492 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
VMP1-206ENST00000587945 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
VMP1-206ENST00000587945 FABP6P51161 128 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 MAP2K6P52564 334 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 SLC18A1P54219 525 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 COPZ1P61923 177 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 HOXC5Q00444 222 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 DMTNQ08495 405 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 SLC2A7Q6PXP3 512 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 GPAT4Q86UL3 456 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 FBXL14Q8N1E6 418 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 MIER2Q8N344 545 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 GTF2H4Q92759 462 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 MAL2Q969L2 176 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 TMEM45BQ96B21 275 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 AMBRA1Q9C0C7 1298 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 BARX1Q9HBU1 254 aaPredicted RBP12.57□□□□□ -0.4
VMP1-206ENST00000587945 CBLN4Q9NTU7 201 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 PCDHB14Q9Y5E9 798 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 ATP23Q9Y6H3 246 aa12.57□□□□□ -0.4
VMP1-206ENST00000587945 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 A8MVM7 634 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 KLF11O14901 512 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 CRLF1O75462 422 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 MPGP29372 298 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 P2RY4P51582 365 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 NUDT6P53370 316 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 LARS2Q15031 903 aaKnown RBP12.56□□□□□ -0.4
VMP1-206ENST00000587945 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 MSANTD1Q6ZTZ1 278 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 DEPDC4Q8N2C3 294 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 MUC15Q8N387 334 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 C1orf162Q8NEQ5 155 aaPredicted RBP12.56□□□□□ -0.4
VMP1-206ENST00000587945 C3orf49Q96BT1 292 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 SF3B5Q9BWJ5 86 aaKnown RBP12.56□□□□□ -0.4
VMP1-206ENST00000587945 SPATA9Q9BWV2 254 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 TAPBPLQ9BX59 468 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
VMP1-206ENST00000587945 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 USH1CQ9Y6N9 552 aa12.56□□□□□ -0.4
VMP1-206ENST00000587945 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 HNRNPCL2B2RXH8 293 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 CLIC1O00299 241 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
VMP1-206ENST00000587945 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 SELENOPP49908 381 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 RGNQ15493 299 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 ZNF311Q5JNZ3 666 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 BEND6Q5SZJ8 279 aaPredicted RBP12.55□□□□□ -0.4
VMP1-206ENST00000587945 C1orf140Q5VVS0 124 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 EPGNQ6UW88 154 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 KDM8Q8N371 416 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 C17orf78Q8N4C9 275 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 ADAD1Q96M93 576 aaKnown RBP12.55□□□□□ -0.4
VMP1-206ENST00000587945 RSPO3Q9BXY4 272 aaPredicted RBP12.55□□□□□ -0.4
VMP1-206ENST00000587945 CACYBPQ9HB71 228 aaKnown RBP12.55□□□□□ -0.4
VMP1-206ENST00000587945 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 IFT52Q9Y366 437 aa12.55□□□□□ -0.4
VMP1-206ENST00000587945 TMEM247A6NEH6 219 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 GPRIN2O60269 458 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 NPIPB7O75200 414 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 KRT33AO76009 404 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 LGI1O95970 557 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 TP53P04637 393 aaPredicted RBP12.54□□□□□ -0.4
VMP1-206ENST00000587945 PRPS1P60891 318 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 RAB35Q15286 201 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 NRF1Q16656 503 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 CREB3L2Q70SY1 520 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 C10orf111Q8N326 155 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 POMGNT2Q8NAT1 580 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 SLC25A36Q96CQ1 311 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 RHNO1Q9BSD3 238 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 FKRPQ9H9S5 495 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 A4GALTQ9NPC4 353 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
VMP1-206ENST00000587945 SLAMF8Q9P0V8 285 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 SEC14L4Q9UDX3 406 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 MOKQ9UQ07 419 aa12.54□□□□□ -0.4
VMP1-206ENST00000587945 SONP18583 2426 aaKnown RBP12.53□□□□□ -0.4
VMP1-206ENST00000587945 CD5LO43866 347 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 UPK3AO75631 287 aa12.53□□□□□ -0.4
VMP1-206ENST00000587945 AHSA1O95433 338 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms