RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TTKP33981 857 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 POLR2JP52435 117 aaKnown RBP16.47■□□□□ 0.23
TRIM47-205ENST00000587774 IRX1P78414 480 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-205ENST00000587774 NRF1Q16656 503 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 C6orf10Q5SRN2 563 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 WBP2NLQ6ICG8 309 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 MSANTD1Q6ZTZ1 278 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 CLIP4Q8N3C7 705 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 WDR31Q8NA23 367 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 OR9K2Q8NGE7 335 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 TMEM45BQ96B21 275 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 TLCD1Q96CP7 247 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 ZNF385AQ96PM9 386 aaKnown RBP16.47■□□□□ 0.23
TRIM47-205ENST00000587774 DHRS9Q9BPW9 319 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 C1QTNF6Q9BXI9 259 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 RMND5AQ9H871 391 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 BARX1Q9HBU1 254 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-205ENST00000587774 CHST2Q9Y4C5 530 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 SVEP1Q4LDE5 3571 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.46■□□□□ 0.231e-12■■□□□ 12.8
TRIM47-205ENST00000587774 AQP7P3A6NL99 342 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 UBDO15205 165 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 FRS3O43559 492 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 LARS2Q15031 903 aaKnown RBP16.46■□□□□ 0.23
TRIM47-205ENST00000587774 SERPINA11Q86U17 422 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 GPAT4Q86UL3 456 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 C17orf78Q8N4C9 275 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 ZIC4Q8N9L1 334 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 SF3B5Q9BWJ5 86 aaKnown RBP16.46■□□□□ 0.23
TRIM47-205ENST00000587774 SLC17A5Q9NRA2 495 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 CBLN4Q9NTU7 201 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 ADPRHL2Q9NX46 363 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 AMDHD2Q9Y303 409 aa16.46■□□□□ 0.23
TRIM47-205ENST00000587774 SSX4O60224 188 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 MPGP29372 298 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 P2RY4P51582 365 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 COPZ1P61923 177 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 AAED1Q7RTV5 226 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 FBXL14Q8N1E6 418 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 MIER2Q8N344 545 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 MUC15Q8N387 334 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 PAIP1Q9H074 479 aaKnown RBP16.45■□□□□ 0.22
TRIM47-205ENST00000587774 TMBIM4Q9HC24 238 aa16.45■□□□□ 0.22
TRIM47-205ENST00000587774 FAM234BA2RU67 622 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 A8MVM7 634 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 TMEM229AB2RXF0 380 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 KLF11O14901 512 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 CRLF1O75462 422 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 NUDT7P0C024 238 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 HOXB9P17482 250 aaPredicted RBP16.44■□□□□ 0.22
TRIM47-205ENST00000587774 NCF2P19878 526 aaPredicted RBP16.44■□□□□ 0.22
TRIM47-205ENST00000587774 NUDT6P53370 316 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 TGFBR3Q03167 851 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 C1orf140Q5VVS0 124 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 SLC2A7Q6PXP3 512 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 HTRA1Q92743 480 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 GTF2H4Q92759 462 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 MAL2Q969L2 176 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 C3orf49Q96BT1 292 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 ADAD1Q96M93 576 aaKnown RBP16.44■□□□□ 0.22
TRIM47-205ENST00000587774 MDFIQ99750 246 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 SPATA9Q9BWV2 254 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 TAPBPLQ9BX59 468 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 THUMPD1Q9NXG2 353 aaKnown RBP16.44■□□□□ 0.22
TRIM47-205ENST00000587774 PCDHB14Q9Y5E9 798 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
TRIM47-205ENST00000587774 IGHV4-30-2A0A087WSY4 118 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 HNRNPCL2B2RXH8 293 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 HNRNPCL1O60812 293 aaKnown RBP16.43■□□□□ 0.22
TRIM47-205ENST00000587774 NPIPB7O75200 414 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 TP53P04637 393 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-205ENST00000587774 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-205ENST00000587774 FABP6P51161 128 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 LGALS3BPQ08380 585 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 RGNQ15493 299 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 ZSWIM7Q19AV6 140 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 POMGNT2Q8NAT1 580 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 ALKBH3Q96Q83 286 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-205ENST00000587774 CACYBPQ9HB71 228 aaKnown RBP16.43■□□□□ 0.22
TRIM47-205ENST00000587774 A4GALTQ9NPC4 353 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 PRDM4Q9UKN5 801 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 ZNF232Q9UNY5 417 aa16.43■□□□□ 0.22
TRIM47-205ENST00000587774 A0A096LPI6 279 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 ATP6V1G2-DDX39BF2Z307 99 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 CLIC1O00299 241 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 CD5LO43866 347 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 BMP2P12643 396 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 SELENOPP49908 381 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 HOXC5Q00444 222 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 FADDQ13158 208 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 ZNF311Q5JNZ3 666 aa16.42■□□□□ 0.22
TRIM47-205ENST00000587774 BEND6Q5SZJ8 279 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms