RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ADORA3P0DMS8 318 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PIPP12273 146 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 MAKP20794 623 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 CNR1P21554 472 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TCEA1P23193 301 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 AHCYP23526 432 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 F8A1P23610 371 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SRD5A2P31213 254 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 POLR2IP36954 125 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 DAP3P51398 398 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 GAS1P54826 345 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 ACTC1P68032 377 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 ACTA1P68133 377 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PLAURQ03405 335 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TLE3Q04726 772 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 MFAP5Q13361 173 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TGIF1Q15583 401 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 OR1C1Q15619 314 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 NEDD8Q15843 81 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SGCBQ16585 318 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 OCLNQ16625 522 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 GLYR1Q49A26 553 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 SYT14P1Q58G82 188 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 EMC4Q5J8M3 183 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 NXNL2Q5VZ03 156 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 FAM205BPQ63HN1 556 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 B3GNTL1Q67FW5 361 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 BICRALQ6AI39 1079 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 GPR139Q6DWJ6 353 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 DESI1Q6ICB0 168 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 DNM1P34Q6PK57 102 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 LINC00114Q6XXX2 140 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 Q6ZPB1 254 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 LINC00696Q6ZRV3 163 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PRSS48Q7RTY5 328 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 MDGA2Q7Z553 956 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 ADCK1Q86TW2 530 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 LNX2Q8N448 690 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 FADS6Q8N9I5 356 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SCAIQ8N9R8 606 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 ATP6V1C2Q8NEY4 427 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RNF138Q8WVD3 245 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 SMPDL3BQ92485 455 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RORBQ92753 470 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 FGF11Q92914 225 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 LRR1Q96L50 414 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 NAA11Q9BSU3 229 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 RSPO3Q9BXY4 272 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 PLA2G12AQ9BZM1 189 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RNF32Q9H0A6 362 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 RACGAP1Q9H0H5 632 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 UBQLN3Q9H347 655 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 EXO5Q9H790 373 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 MEPEQ9NQ76 525 aaPredicted RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 TIGARQ9NQ88 270 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 CMC2Q9NRP2 79 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 INIPQ9NRY2 104 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PLCXD1Q9NUJ7 323 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 DNAJC27Q9NZQ0 273 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 WARS2Q9UGM6 360 aaKnown RBP5.61□□□□□ -1.51
LIG3-206ENST00000586058 NPIPA1Q9UND3 350 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 ERGIC3Q9Y282 383 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 HIF3AQ9Y2N7 669 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 HDGFL3Q9Y3E1 203 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 PCDHGB7Q9Y5F8 929 aa5.61□□□□□ -1.51
LIG3-206ENST00000586058 TNRC6AQ8NDV7 1962 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 TRABD2BA6NFA1 517 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 A6NIZ1 184 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 A6NL46 340 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 C11orf98E9PRG8 122 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SULT2B1O00204 365 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 IMPA2O14732 288 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 XPNPEP2O43895 674 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 EIF1BO60739 113 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 ZNF354AO60765 605 aaPredicted RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 ADAM11O75078 769 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 TRAPPC6AO75865 159 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 LYPD3O95274 346 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 DBTP11182 482 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 PEPDP12955 493 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 APEHP13798 732 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 EPHA2P29317 976 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SDHAP31040 664 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 PTGDSP41222 190 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CAPZA2P47755 286 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 MTNR1AP48039 350 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 DNASE1L1P49184 302 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CENPAP49450 140 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ST13P50502 369 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 NUDT6P53370 316 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 UCNP55089 124 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 CTXN1P60606 82 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RAP1BP61224 184 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RPS4XP62701 263 aaKnown RBP5.6□□□□□ -1.51
LIG3-206ENST00000586058 RAP1AP62834 184 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 SLC35A1P78382 337 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 FOXK2Q01167 660 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 ZNF91Q05481 1191 aa5.6□□□□□ -1.51
LIG3-206ENST00000586058 RPL18Q07020 188 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms