RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ARHGAP9Q9BRR9 750 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 B3GNT4Q9C0J1 378 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 TSPAN10Q9H1Z9 355 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 LAMA1P25391 3075 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 DENND4CQ5VZ89 1909 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ZNF264O43296 627 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 CHP2O43745 196 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ICOSLGO75144 302 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ARL6IP5O75915 188 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 PIPP12273 146 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ZNF823P16415 610 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 CASP3P42574 277 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 FRKP42685 505 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 OR7E24Q6IFN5 339 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ZNF595Q8IYB9 648 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 PTP4A1Q93096 173 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 RFT1Q96AA3 541 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ALG12Q9BV10 488 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ING3Q9NXR8 418 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 SIGLEC7Q9Y286 467 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 PI4KAP42356 2102 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 DHFRP00374 187 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 CPEP16870 476 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ELK1P19419 428 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 TBXA2RP21731 343 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 BCKDHBP21953 392 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 SF3B4Q15427 424 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 TATDN3Q17R31 274 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 SLC25A35Q3KQZ1 300 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 SLC6A19Q695T7 634 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 LRRC69Q6ZNQ3 347 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ZNF627Q7L945 461 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 OR10H5Q8NGA6 315 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 OR6C1Q96RD1 312 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 PHF7Q9BWX1 381 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 ANKRD10Q9NXR5 420 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 SIRT4Q9Y6E7 314 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-217ENST00000584582 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
TOP3A-217ENST00000584582 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 ATP1B1P05026 303 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 IL9P15248 144 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 FOLR1P15328 257 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 PRKXP51817 358 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 RACK1P63244 317 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 CD226Q15762 336 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 NTRK2Q16620 822 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 GLYR1Q49A26 553 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 AGAP7PQ5VUJ5 663 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 LRRN1Q6UXK5 716 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 OR4M1Q8NGD0 313 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 PCNPQ8WW12 178 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 DCDC2BA2VCK2 349 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 ARRDC5A6NEK1 342 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 OIP5O43482 229 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 ZGLP1P0C6A0 271 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 FOSL2P15408 326 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 EEF1A1P68104 462 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 CCINQ13939 588 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 AADACL4Q5VUY2 407 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 AGAP6Q5VW22 663 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 XKRXQ6PP77 449 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 GPALPP1Q8IXQ4 340 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 EID2Q8N6I1 236 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 AGAP4Q96P64 663 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 CCDC32Q9BV29 185 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 EMC6Q9BV81 110 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 COMMD4Q9H0A8 199 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 CMC2Q9NRP2 79 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 RNF215Q9Y6U7 377 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 HELZP42694 1942 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 GBF1Q92538 1859 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 TMEM129A0AVI4 362 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 FAM221BA6H8Z2 402 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 TLCD2A6NGC4 264 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 ADAM11O75078 769 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 MT-ND4P03905 459 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 WNT1P04628 370 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 THBS1P07996 1170 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 MAP3K8P41279 467 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 SELENBP1Q13228 472 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 OR7A5Q15622 319 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 TOMM34Q15785 309 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 NUP54Q7Z3B4 507 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 PM20D2Q8IYS1 436 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 DNAJA4Q8WW22 397 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 APOBEC4Q8WW27 367 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 MESP1Q9BRJ9 268 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 THAP7Q9BT49 309 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 NOX4Q9NPH5 578 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 UGT2A1Q9Y4X1 527 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 TMEM184BQ9Y519 407 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-217ENST00000584582 DNAJC13O75165 2243 aa10.36□□□□□ -0.75
TOP3A-217ENST00000584582 CSF3P09919 207 aa10.35□□□□□ -0.75
TOP3A-217ENST00000584582 SRFP11831 508 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms