RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TMEM72A0PK05 275 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 FAM234BA2RU67 622 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 PGM3O95394 542 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 TGDSO95455 350 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 BCHEP06276 602 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 THBS1P07996 1170 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ETFAP13804 333 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF16P17020 682 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-206ENST00000584112 CXCR1P25024 350 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 IDUAP35475 653 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ACVR1BP36896 505 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 MVDP53602 400 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 STX1BP61266 288 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ACTG1P63261 375 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 H3F3AP84243 136 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ETFDHQ16134 617 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF672Q499Z4 452 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-206ENST00000584112 FBLN7Q53RD9 439 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 AGBL2Q5U5Z8 902 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 RNF220Q5VTB9 566 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 WBP2NLQ6ICG8 309 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 PAQR6Q6TCH4 344 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 SEZ6L2Q6UXD5 910 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF836Q6ZNA1 936 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.79□□□□□ -0.84
CCDC47-206ENST00000584112 MAVSQ7Z434 540 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 OR52P1PQ8NH57 321 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 DNAJA3Q96EY1 480 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 RADILQ96JH8 1075 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 OR52B2Q96RD2 323 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 SLC6A13Q9NSD5 602 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 FAIMQ9NVQ4 179 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 TAS2R16Q9NYV7 291 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 MALT1Q9UDY8 824 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 MGAT4BQ9UQ53 548 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF443Q9Y2A4 671 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-206ENST00000584112 IFT52Q9Y366 437 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 A0A0G2JPF8 293 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 DPRXA6NFQ7 191 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 HNRNPCL2B2RXH8 293 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 HNRNPCL3B7ZW38 293 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 POLR3GO15318 223 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-206ENST00000584112 HNRNPCL1O60812 293 aaKnown RBP9.78□□□□□ -0.84
CCDC47-206ENST00000584112 RAD51DO75771 328 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 IGHV3-9P01782 118 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 GPIP06744 558 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 TFPTP0C1Z6 253 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 HNRNPCL4P0DMR1 293 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 IMPDH2P12268 514 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 EDNRAP25101 427 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 FAPQ12884 760 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 FADDQ13158 208 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 MAPK11Q15759 364 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 C1QTNF12Q5T7M4 302 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 PRAMEF8Q5VWM4 474 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 PRAMEF7Q5VXH5 474 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 OR7E24Q6IFN5 339 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 KLHL17Q6TDP4 642 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 EPGNQ6UW88 154 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM108Q6UXF1 575 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 CASP12Q6UXS9 341 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 VRK2Q86Y07 508 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 CCDC103Q8IW40 242 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 GOLGA6L1Q8N7Z2 621 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 KBTBD8Q8NFY9 601 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 OR9I1Q8NGQ6 314 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-206ENST00000584112 LRRC8CQ8TDW0 803 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 SMAP2Q8WU79 429 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-206ENST00000584112 SLC38A5Q8WUX1 472 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 GTPBP3Q969Y2 492 aaKnown RBP9.78□□□□□ -0.84
CCDC47-206ENST00000584112 VPS33AQ96AX1 596 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM19Q96HH6 336 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 C7orf26Q96N11 449 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 TRIM2Q9C040 744 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 ALG2Q9H553 416 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 TCF7L2Q9NQB0 619 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 RLIMQ9NVW2 624 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 UPB1Q9UBR1 384 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 FLVCR1Q9Y5Y0 555 aa9.78□□□□□ -0.84
CCDC47-206ENST00000584112 RYR1P21817 5038 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 A0A096LPI6 279 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 A8MVM7 634 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 OVOL3O00110 214 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 CLIC1O00299 241 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 ABCD4O14678 606 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 RAMP1O60894 148 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 SHOX2O60902 331 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 DANCRP0C864 163 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 GKN3PP0CG01 181 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 NCF2P19878 526 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 ACAA2P42765 397 aaKnown RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 MRPL19P49406 292 aaKnown RBP9.77□□□□□ -0.85
CCDC47-206ENST00000584112 CDH11P55287 796 aa9.77□□□□□ -0.85
CCDC47-206ENST00000584112 TGFBR3Q03167 851 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms