RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 OR52I1Q8NGK6 324 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 BRSK1Q8TDC3 778 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 C7orf33Q8WU49 177 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 CHCHD10Q8WYQ3 142 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 N4BP2L2Q92802 583 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 UFD1Q92890 307 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NT5C3BQ969T7 300 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 PHYHIPLQ96FC7 376 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 TIMD4Q96H15 378 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 TPD52L3Q96J77 140 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 IMMP1LQ96LU5 166 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 MTMR9Q96QG7 549 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 PKIBQ9C010 78 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 POLR2J2Q9GZM3 115 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 POLR2J3Q9H1A7 115 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NARFLQ9H6Q4 476 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 RANBP3Q9H6Z4 567 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 NIPAL2Q9H841 368 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 SLC25A22Q9H936 323 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 POLE4Q9NR33 117 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 ABCG2Q9UNQ0 655 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 CDH10Q9Y6N8 788 aa2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 CFAP65Q6ZU64 1925 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-209ENST00000583441 TCRBV9S1A1TA0A576 114 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 STAMBPO95630 424 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 NDUFB10O96000 172 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TIMP1P01033 207 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 KLK3P07288 261 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 RBMY1CP0DJD4 496 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 DDOSTP39656 456 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 OPRD1P41143 372 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 GLP1RP43220 463 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 GYG1P46976 350 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 WNT4P56705 351 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 RPS14P62263 151 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 GNMTQ14749 295 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 DUSP7Q16829 419 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 CARD16Q5EG05 197 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 DMRTC1Q5HYR2 192 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 C6orf226Q5I0X4 101 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 GPRC6AQ5T6X5 926 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 OTPQ5XKR4 325 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TIGD3Q6B0B8 471 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 ENPP6Q6UWR7 440 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 FAM220AQ7Z4H9 259 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TRIM69Q86WT6 500 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 UBE2J2Q8N2K1 259 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 NKAPP1Q8N9T2 125 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 FNDC5Q8NAU1 212 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 OR4K14Q8NGD5 310 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 OR8J1Q8NGP2 316 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 UCN3Q969E3 161 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TM4SF19Q96DZ7 209 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 NUS1Q96E22 293 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF641Q96N77 438 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TECTBQ96PL2 329 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 MYCBPQ99417 103 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 PLIN2Q99541 437 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 P2RY13Q9BPV8 354 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 TCHPQ9BT92 498 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 SUN2Q9UH99 717 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 PEX16Q9Y5Y5 336 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 FANCIQ9NVI1 1328 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 CROCCQ5TZA2 2017 aa2.63□□□□□ -1.99
SMCHD1-209ENST00000583441 PLEKHG1Q9ULL1 1385 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 PLEKHH1Q9ULM0 1364 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 IGKV6D-21A0A0A0MT36 114 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 A0A0G2JRQ6 117 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 OR5B21A6NL26 309 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 EMC8O43402 210 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 SNX4O95219 450 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 OXSR1O95747 527 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 IGLV1-47P01700 117 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 P04436 131 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 SLC2A3P11169 496 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 NPR2P20594 1047 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 COX7A1P24310 79 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 CD1CP29017 333 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 PRDX3P30048 256 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 YAP1P46937 504 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ARRB1P49407 418 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 KLK7P49862 253 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 GPM6AP51674 278 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ACTR3P61158 418 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 CDK16Q00536 496 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 MRPL28Q13084 256 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 OR5I1Q13606 314 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 NSDHLQ15738 373 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF79Q15937 498 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 CCDC14Q49A88 953 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 BOLA3Q53S33 107 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 C1orf100Q5SVJ3 147 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 OR2A2Q6IF42 318 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 TAS2R42Q7RTR8 314 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ZNF571Q7Z3V5 609 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 DHDDSQ86SQ9 333 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 PLA2G4DQ86XP0 818 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 EGFL6Q8IUX8 553 aa2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 ERI1Q8IV48 349 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-209ENST00000583441 CEND1Q8N111 149 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms