RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 UMPSP11172 480 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 FKBP2P26885 142 aaKnown RBP12.53□□□□□ -0.4
GGA3-216ENST00000583282 GRPRP30550 384 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
GGA3-216ENST00000583282 MAGEA2P43356 314 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 AGFG1P52594 562 aaKnown RBP12.53□□□□□ -0.4
GGA3-216ENST00000583282 SLC35A1P78382 337 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 IQCCQ4KMZ1 466 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
GGA3-216ENST00000583282 FAM69AQ5T7M9 428 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 ABLIM2Q6H8Q1 611 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 TMEM211Q6ICI0 200 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 NRMQ8IXM6 262 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 CNEP1R1Q8N9A8 125 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 RNF128Q8TEB7 428 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 WNT2BQ93097 391 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 SDCCAG3Q96C92 435 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 ZNF587Q96SQ5 575 aaPredicted RBP12.53□□□□□ -0.4
GGA3-216ENST00000583282 TM9SF2Q99805 663 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 ZNF426Q9BUY5 554 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 C20orf141Q9NUB4 165 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 VNN3Q9NY84 501 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 Q9UFV3 132 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 HIVEP3Q5T1R4 2406 aa12.53□□□□□ -0.4
GGA3-216ENST00000583282 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.4
GGA3-216ENST00000583282 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.4
GGA3-216ENST00000583282 MYO7BQ6PIF6 2116 aa12.52□□□□□ -0.4
GGA3-216ENST00000583282 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 IFI30P13284 250 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 GPR4P46093 362 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 FOXF2Q12947 444 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 PPP1R8Q12972 351 aaKnown RBP12.52□□□□□ -0.41
GGA3-216ENST00000583282 ZNF74Q16587 644 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 PODNL1Q6PEZ8 512 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 TBPL2Q6SJ96 375 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 CCDC103Q8IW40 242 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 TMEM99Q8N816 258 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 SGTBQ96EQ0 304 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 DHRS1Q96LJ7 313 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 ZNF347Q96SE7 839 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 CHID1Q9BWS9 393 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 ASPNQ9BXN1 380 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 RNF122Q9H9V4 155 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 MEPEQ9NQ76 525 aaPredicted RBP12.52□□□□□ -0.41
GGA3-216ENST00000583282 RNF6Q9Y252 685 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 U3KQV3 271 aa12.52□□□□□ -0.41
GGA3-216ENST00000583282 A0A087WUU8 490 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 DNPH1O43598 174 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 TIPRLO75663 272 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 SERPINI2O75830 405 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 OR7A10O76100 309 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 CST1P01037 141 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 FUT1P19526 365 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 BMP5P22003 454 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 TIMP3P35625 211 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 LTBQ06643 244 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 RASGEF1BQ0VAM2 473 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 SEC23BQ15437 767 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 VWA1Q6PCB0 445 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 PAQR6Q6TCH4 344 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 PIWIL3Q7Z3Z3 882 aaKnown RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 NANOGNBQ7Z5D8 188 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 GPAT4Q86UL3 456 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 PIGXQ8TBF5 258 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 SLC7A13Q8TCU3 470 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 POP5Q969H6 163 aaKnown RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 SLCO4A1Q96BD0 722 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 FAM46AQ96IP4 442 aaKnown RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 NAA11Q9BSU3 229 aaPredicted RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 KLHL4Q9C0H6 718 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 ANKRD19PQ9H560 264 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 REEP1Q9H902 201 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 CHST11Q9NPF2 352 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 SAMHD1Q9Y3Z3 626 aaKnown RBP12.51□□□□□ -0.41
GGA3-216ENST00000583282 LYVE1Q9Y5Y7 322 aa12.51□□□□□ -0.41
GGA3-216ENST00000583282 RELNP78509 3460 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 A0A1W2PRQ8 180 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 HSPB2A8KAH6 182 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 EEF1E1-BLOC1S5C9J1V9 151 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 C11orf98E9PRG8 122 aa12.5□□□□□ -0.41
GGA3-216ENST00000583282 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms