RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CD276Q5ZPR3 534 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 RADILQ96JH8 1075 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 NOX4Q9NPH5 578 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 EXOSC3Q9NQT5 275 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CUTCQ9NTM9 273 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 HAO2Q9NYQ3 351 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 C1SP09871 688 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 MAGEB1P43366 347 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 CST9LP1Q5W188 147 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 PAPD4Q6PIY7 484 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 NLRP8Q86W28 1048 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 LINC01599Q8WXQ3 324 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF583Q96ND8 569 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 PKMYT1Q99640 499 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 MACROD1Q9BQ69 325 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 SDHAF2Q9NX18 166 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 SNX11Q9Y5W9 270 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 A6NCN8 305 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 LRIT2A6NDA9 550 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TRAPPC2LH3BP13 241 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 LILRB3O75022 631 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 FUCA1P04066 466 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TIMP2P16035 220 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 HIST1H1TP22492 207 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TPMTP51580 245 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 BPHLQ86WA6 291 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 CNR1P21554 472 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 PTGER1P34995 402 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 CPXM2Q8N436 756 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 NLGN4YQ8NFZ3 816 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 FAM213BQ8TBF2 198 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 BTF3L4Q96K17 158 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 A0A0A6YYC8 382 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 I3L1I5 382 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TPPPO94811 219 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 LTB4RQ15722 352 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 HIST2H3AQ71DI3 136 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF808Q8N4W9 903 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 OR2A12Q8NGT7 310 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 ANKRD19PQ9H560 264 aa13.54□□□□□ -0.24
CSNK1D-217ENST00000581241 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 MAN2B1O00754 1011 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF780AO75290 641 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 PCNPQ8WW12 178 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 POFUT1Q9H488 388 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 TRDV1A0A1B0GX56 115 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ACOD1A6NK06 481 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 NAGAP17050 411 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 NDUFA6P56556 154 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 BTG1P62324 171 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 CD300LGQ6UXG3 332 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 LIPIQ6XZB0 460 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 OCSTAMPQ9BR26 566 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 MYH1P12882 1939 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 SMAD6O43541 496 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 PMS2P2O95744 297 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 AIFM1O95831 613 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF865P0CJ78 1059 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 PCBD1P61457 104 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 COL9A2Q14055 689 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 HEPHL1Q6MZM0 1159 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 TMEM40Q8WWA1 233 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 STMND1H3BQB6 276 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF217O75362 1048 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 GJB3O75712 270 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 LALBAP00709 142 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 CCR6P51684 374 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 RNF4P78317 190 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ADPRMQ3LIE5 342 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 GHSRQ92847 366 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 RAB3CQ96E17 227 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 OR5M11Q96RB7 305 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 SGPP1Q9BX95 441 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ADAMTS4O75173 837 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 PAPLNO95428 1278 aa13.53□□□□□ -0.24
CSNK1D-217ENST00000581241 ARSAP15289 507 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms