RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ZDHHC6Q9H6R6 413 aa3.44□□□□□ -1.86
NF1-220ENST00000581113 GEMIN7Q9H840 131 aaKnown RBP3.44□□□□□ -1.86
NF1-220ENST00000581113 CD300AQ9UGN4 299 aa3.44□□□□□ -1.86
NF1-220ENST00000581113 SPATA2Q9UM82 520 aa3.44□□□□□ -1.86
NF1-220ENST00000581113 FOXJ3Q9UPW0 622 aa3.44□□□□□ -1.86
NF1-220ENST00000581113 BZW2Q9Y6E2 419 aaKnown RBP3.44□□□□□ -1.86
NF1-220ENST00000581113 FOCADQ5VW36 1801 aa3.44□□□□□ -1.86
NF1-220ENST00000581113 MGAMO43451 1857 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 BCLAF3A2AJT9 711 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 WASH3PC4AMC7 463 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 H0YHG0 523 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 HAS3O00219 553 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DUSP11O75319 330 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 ANXA9O76027 345 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 OR5F1O95221 314 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 LCA5LO95447 670 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 SLC25A27O95847 323 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 EPOP01588 193 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 ALPIP09923 528 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 GNSP15586 552 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 PRKACAP17612 351 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 HNRNPH3P31942 346 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 TNFSF10P50591 281 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 TPMTP51580 245 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 CCL11P51671 97 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 ARHGDIAP52565 204 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 RPL23AP62750 156 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 UBE2IP63279 158 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 MFGE8Q08431 387 aaPredicted RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 SIGLEC14Q08ET2 396 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 NCBP1Q09161 790 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 MAB21L1Q13394 359 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 CYLC2Q14093 348 aaPredicted RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 SLC17A1Q14916 467 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 PON2Q15165 354 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 PARP6Q2NL67 630 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 SBK1Q52WX2 424 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 TEX44Q53QW1 395 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 PAGE2BQ5JRK9 111 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 ZNF506Q5JVG8 444 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DCAF12Q5T6F0 453 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 SEL1L3Q68CR1 1132 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 SPECC1LQ69YQ0 1117 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 TMEM220Q6QAJ8 160 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 VTCN1Q7Z7D3 282 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 LUZP2Q86TE4 346 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 VRK2Q86Y07 508 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 LRRC34Q8IZ02 419 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 SELENOHQ8IZQ5 122 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 FGFRL1Q8N441 504 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DNAAF3Q8N9W5 541 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 FNDC5Q8NAU1 212 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 NDNFQ8TB73 568 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 MITD1Q8WV92 249 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 HAS2Q92819 552 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 ADIPOR1Q96A54 375 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 MCUR1Q96AQ8 359 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 TRNT1Q96Q11 434 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 AGPAT1Q99943 283 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 TMEM246Q9BRR3 403 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 NUSAP1Q9BXS6 441 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 TRIM9Q9C026 710 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DNTTIP1Q9H147 329 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 AUNIPQ9H7T9 357 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DCLRE1BQ9H816 532 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 NT5DC2Q9H857 520 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DDX28Q9NUL7 540 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 MTCH1Q9NZJ7 389 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 RNF14Q9UBS8 474 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 PEF1Q9UBV8 284 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 LCMT1Q9UIC8 334 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 DDX60LQ5H9U9 1706 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 ATAD5Q96QE3 1844 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 CDK5RAP2Q96SN8 1893 aa3.43□□□□□ -1.86
NF1-220ENST00000581113 MYO5AQ9Y4I1 1855 aaKnown RBP3.43□□□□□ -1.86
NF1-220ENST00000581113 CEP290O15078 2479 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 MYH1P12882 1939 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 MBLAC1A4D2B0 266 aaPredicted RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 ZNF840PA6NDX5 716 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 E9PAM4 449 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 PDXKO00764 312 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 ARPC3O15145 178 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 GPAA1O43292 621 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CRTAPO75718 401 aaPredicted RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 ATP5HO75947 161 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CPNE6O95741 557 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CAPN1P07384 714 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 HCKP08631 526 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 SERPINF2P08697 491 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CYBAP13498 195 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CYP11B1P15538 503 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 TCN1P20061 433 aaPredicted RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 MATKP42679 507 aa3.42□□□□□ -1.86
NF1-220ENST00000581113 CEBPDP49716 269 aaPredicted RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 RPL27P61353 136 aaKnown RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 YWHAEP62258 255 aaKnown RBP3.42□□□□□ -1.86
NF1-220ENST00000581113 KDSRQ06136 332 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms