RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SLC35G5Q96KT7 338 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 DUSP26Q9BV47 211 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 OR51I1Q9H343 314 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 NARFLQ9H6Q4 476 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 ZNF442Q9H7R0 627 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 DYNLRB1Q9NP97 96 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 PCDHB10Q9UN67 800 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 WDR45Q9Y484 360 aa16.53■□□□□ 0.24
NDEL1-209ENST00000580738 ARPC4-TTLL3A0A0A6YYG9 625 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 ZNF208O43345 1280 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 CHRNGP07510 517 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 OR12D1P0DN82 309 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 TACR3P29371 465 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 HTR3AP46098 478 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 SELENOPP49908 381 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 KHKP50053 298 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 POLR2HP52434 150 aaKnown RBP16.52■□□□□ 0.24
NDEL1-209ENST00000580738 HILS1P60008 231 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 KCNJ10P78508 379 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 FUT5Q11128 374 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 C3orf36Q3SXR2 165 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 IL23RQ5VWK5 629 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 FRRS1Q6ZNA5 592 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 GPAT4Q86UL3 456 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 CLDND2Q8NHS1 167 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 XAGE5Q8WWM1 108 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 PMM1Q92871 262 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 RAB8BQ92930 207 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 PPP3R2Q96LZ3 170 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 C3orf30Q96M34 536 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 ALKBH3Q96Q83 286 aaPredicted RBP16.52■□□□□ 0.24
NDEL1-209ENST00000580738 PRPF18Q99633 342 aaKnown RBP16.52■□□□□ 0.24
NDEL1-209ENST00000580738 SF3B5Q9BWJ5 86 aaKnown RBP16.52■□□□□ 0.24
NDEL1-209ENST00000580738 NELFAQ9H3P2 528 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 EXOSC3Q9NQT5 275 aaKnown RBP16.52■□□□□ 0.24
NDEL1-209ENST00000580738 EXD2Q9NVH0 621 aa16.52■□□□□ 0.24
NDEL1-209ENST00000580738 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 ZNF587BE7ETH6 402 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 TRIM77I1YAP6 450 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 LYPLA1O75608 230 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-209ENST00000580738 FGF4P08620 206 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 PRPS1L1P21108 318 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 CRHR1P34998 444 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 CEACAM7Q14002 265 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 PGS1Q32NB8 556 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 FAM153CQ494X1 144 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 XKR7Q5GH72 579 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 SHQ1Q6PI26 577 aaKnown RBP16.51■□□□□ 0.23
NDEL1-209ENST00000580738 TRMT10CQ7L0Y3 403 aaKnown RBP16.51■□□□□ 0.23
NDEL1-209ENST00000580738 CKAP2Q8WWK9 683 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
NDEL1-209ENST00000580738 TRRAPQ9Y4A5 3859 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 LIPT2A6NK58 231 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 WNT9BO14905 357 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 UPK3AO75631 287 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 IGKV3-15P01624 115 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 CREB1P16220 341 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 CCT5P48643 541 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 PCLAFQ15004 111 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 OR7A5Q15622 319 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 PDLIM3Q53GG5 364 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-209ENST00000580738 PRR31Q5SQ13 230 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 C6orf136Q5SQH8 315 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 TNFAIP8L2Q6P589 184 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-209ENST00000580738 C1orf229Q6ZS94 237 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-209ENST00000580738 AGR3Q8TD06 166 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 MAGEE2Q8TD90 523 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-209ENST00000580738 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 ROPN1LQ96C74 230 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 LRRC37BQ96QE4 947 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 POLE3Q9NRF9 147 aa16.5■□□□□ 0.23
NDEL1-209ENST00000580738 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.5■□□□□ 0.23
NDEL1-209ENST00000580738 IGHV2OR16-5A0A0B4J2B6 119 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 PRAMEF27A3QJZ7 478 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 AQP7P3A6NL99 342 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 VSTM5A8MXK1 200 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 GPIP06744 558 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 MSMBP08118 114 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 GUSBP08236 651 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 PAX7P23759 505 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 ARFIP2P53365 341 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 SCGB2A2Q13296 93 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 AWAT1Q58HT5 328 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 ELFN2Q5R3F8 820 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 ATAD3BQ5T9A4 648 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 TMEM225Q6GV28 225 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 FAHD2BQ6P2I3 314 aaPredicted RBP16.49■□□□□ 0.23
NDEL1-209ENST00000580738 USP43Q70EL4 1123 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 FAM169BQ8N8A8 192 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 FNDC5Q8NAU1 212 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 FAHD2AQ96GK7 314 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 RBM4Q9BWF3 364 aaKnown RBP16.49■□□□□ 0.23
NDEL1-209ENST00000580738 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 TREM2Q9NZC2 230 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 USP22Q9UPT9 525 aa16.49■□□□□ 0.23
NDEL1-209ENST00000580738 GRIP1Q9Y3R0 1128 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms