RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 VASNQ6EMK4 673 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZNF620Q6ZNG0 422 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 GALNT5Q7Z7M9 940 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MEIOBQ8N635 442 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SCAIQ8N9R8 606 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SMPDL3BQ92485 455 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZNF184Q99676 751 aaPredicted RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 PAQR5Q9NXK6 330 aaPredicted RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 REV1Q9UBZ9 1251 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 CDH10Q9Y6N8 788 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SULT2B1O00204 365 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 DLGAP1O14490 977 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 AQP7O14520 342 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 PTP4A3O75365 173 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 IMPDH2P12268 514 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZNF708P17019 499 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SHC1P29353 583 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 LHX2P50458 406 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 PRPS1P60891 318 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 LTBQ06643 244 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 NPRL3Q12980 569 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 OR7A5Q15622 319 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 KRTCAP3Q53RY4 240 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 WLSQ5T9L3 541 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 NANOGNBQ7Z5D8 188 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 GGNQ86UU5 652 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MEX3DQ86XN8 651 aaKnown RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 DHRSXQ8N5I4 330 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 Q8NA96 180 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ADPRHL1Q8NDY3 354 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZNF555Q8NEP9 628 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 OR13C2Q8NGS9 318 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 OR5J2Q8NH18 312 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 OR2V1Q8NHB1 315 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 FANK1Q8TC84 345 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 OSTF1Q92882 214 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SLC25A36Q96CQ1 311 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZHX1-C8orf76Q96EF9 292 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ADGRG7Q96K78 797 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MOGAT1Q96PD6 335 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 TACO1Q9BSH4 297 aaKnown RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 TOR3AQ9H497 397 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 TIGARQ9NQ88 270 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 PLSCR2Q9NRY7 297 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 IL20Q9NYY1 176 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SIGLEC7Q9Y286 467 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 HIF3AQ9Y2N7 669 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 LIPGQ9Y5X9 500 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 A0A0J9YW62 118 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 LRRN3E7EW58 273 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 H0YAE9 185 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 H3BN98 237 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 EIF1AYO14602 144 aaKnown RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 EIF1BO60739 113 aaKnown RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 SNAP29O95721 258 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 GRPRP30550 384 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 STARP49675 285 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 DIO1P49895 249 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 CRISP1P54107 249 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 CLDN18P56856 261 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 OR2B6P58173 313 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 RAC3P60763 192 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 RPS3AP61247 264 aaKnown RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 RPS4XP62701 263 aaKnown RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 SGCBQ16585 318 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 CTU2Q2VPK5 515 aaKnown RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 ZIK1Q3SY52 487 aaPredicted RBP9.65□□□□□ -0.86
SS18-213ENST00000579640 SLC36A3Q495N2 470 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 TTC23Q5W5X9 447 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 SMARCD3Q6STE5 483 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 OR52L1Q8NGH7 329 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 TEX47Q8TBZ9 253 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 ADI1Q9BV57 179 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 OR52D1Q9H346 318 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 RIBC2Q9H4K1 309 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 RAB26Q9ULW5 256 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 B3GALT5Q9Y2C3 310 aa9.65□□□□□ -0.86
SS18-213ENST00000579640 USP24Q9UPU5 2620 aa9.65□□□□□ -0.87
SS18-213ENST00000579640 TRAV27A0A087WT01 109 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 OR14I1A6ND48 311 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 M0R082 166 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 TNFSF11O14788 317 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 SLC16A6O15403 523 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 SEC14L5O43304 696 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 NDUFB2O95178 105 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 OR6A2O95222 327 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 OPN1LWP04000 364 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 CPN1P15169 458 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 SLC6A6P31641 620 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms