RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 VDAC3Q9Y277 283 aa3.39□□□□□ -1.87
SMARCE1-215ENST00000578995 AP3M1Q9Y2T2 418 aa3.39□□□□□ -1.87
SMARCE1-215ENST00000578995 IFT52Q9Y366 437 aa3.39□□□□□ -1.87
SMARCE1-215ENST00000578995 CADP27708 2225 aa3.39□□□□□ -1.87
SMARCE1-215ENST00000578995 ASH1LQ9NR48 2969 aaKnown RBP3.39□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A087WUJ7 227 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TMED7-TICAM2A0A0A6YYA0 188 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TCRBV3S1A0A5B6 114 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SHISA3A0PJX4 238 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM72A0PK05 275 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CFAP73A6NFT4 308 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CD8B2A6NJW9 211 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF716A6NP11 495 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 C5orf58C9J3I9 102 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NPIPA2E9PIF3 369 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NPIPA3F8WFD2 350 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 J3KTA2 159 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 BCKDKO14874 412 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SMAD9O15198 467 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF208O43345 1280 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 KLF4O43474 513 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 GMFGO60234 142 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CDC40O60508 579 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TNFSF13O75888 250 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 DNAJC8O75937 253 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 AQP8O94778 261 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PRKD3O94806 890 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF682O95780 498 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TGM6O95932 706 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SERPINA1P01009 418 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 LDLRP01130 860 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 BGLAPP02818 100 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 GLI4P10075 376 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF26P17031 533 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PGCP20142 388 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TCEA1P23193 301 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 EDNRAP25101 427 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TACR3P29371 465 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CEACAM8P31997 349 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PTGS2P35354 604 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 EIF1P41567 113 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC1A3P43003 542 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR1E2P47887 323 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 IDH2P48735 452 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CLK3P49761 638 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 MNAT1P51948 309 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 UGT2B15P54855 530 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CDH12P55289 794 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 HPCAP84074 193 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PLGLB1Q02325 96 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TFF3Q07654 80 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 BNIP2Q12982 314 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SELENBP1Q13228 472 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CBFBQ13951 182 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CCNIQ14094 377 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TRIM25Q14258 630 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 LARS2Q15031 903 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR1Q1Q15612 314 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 GXYLT1Q4G148 440 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 LRRC23Q53EV4 343 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ENTPD8Q5MY95 495 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 INTS11Q5TA45 600 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ABLIM2Q6H8Q1 611 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 GLYATQ6IB77 296 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 WBP2NLQ6ICG8 309 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ARHGAP11AQ6P4F7 1023 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF613Q6PF04 617 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 GFRALQ6UXV0 394 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC46A3Q7Z3Q1 461 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 YTHDF3Q7Z739 585 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 CARM1Q86X55 608 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 KRT73Q86Y46 540 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NKAIN4Q8IVV8 208 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF440Q8IYI8 595 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OFCC1Q8IZS5 231 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 EID3Q8N140 333 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF614Q8N883 585 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 C9orf106Q8NAJ2 232 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 RELL2Q8NC24 303 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PAPD5Q8NDF8 572 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 PIK3C3Q8NEB9 887 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR4K17Q8NGC6 315 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR4C15Q8NGM1 316 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR14L1PQ8NHC6 308 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZPLD1Q8TCW7 415 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 RNF128Q8TEB7 428 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 FIG4Q92562 907 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC38A4Q969I6 547 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ABTB1Q969K4 478 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 DUS3LQ96G46 650 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC41A3Q96GZ6 507 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF845Q96IR2 970 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SFXN2Q96NB2 322 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF607Q96SK3 696 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SPATA5L1Q9BVQ7 753 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 OR11A1Q9GZK7 315 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 EVA1AQ9H8M9 152 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 RNF122Q9H9V4 155 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms