RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 PMS2P2O95744 297 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ACTL6AO96019 429 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 TFPIP10646 304 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ZNF708P17019 499 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 UQCRC1P31930 480 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 LHX2P50458 406 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 CRISP1P54107 249 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ADARB1P78563 741 aaKnown RBP14.51□□□□□ -0.09
SS18-211ENST00000578954 TMEM176BQ3YBM2 270 aaPredicted RBP14.51□□□□□ -0.09
SS18-211ENST00000578954 SLC36A3Q495N2 470 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 TMPPEQ6ZT21 453 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ESPNLQ6ZVH7 1005 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 MAMDC2Q7Z304 686 aaPredicted RBP14.51□□□□□ -0.09
SS18-211ENST00000578954 OAFQ86UD1 273 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 DHRSXQ8N5I4 330 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 LRRC17Q8N6Y2 441 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 EXD3Q8N9H8 876 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 SCAIQ8N9R8 606 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ADPRHL1Q8NDY3 354 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 TFAP2CQ92754 450 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 MCCC2Q9HCC0 563 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ZNF71Q9NQZ8 489 aaPredicted RBP14.51□□□□□ -0.09
SS18-211ENST00000578954 FAM118AQ9NWS6 357 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 ALKBH4Q9NXW9 302 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 MRPL39Q9NYK5 338 aaKnown RBP14.51□□□□□ -0.09
SS18-211ENST00000578954 RAB26Q9ULW5 256 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 SLC6A5Q9Y345 797 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 LRRC42Q9Y546 428 aa14.51□□□□□ -0.09
SS18-211ENST00000578954 MAP1BP46821 2468 aaKnown RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 TRGV5A0A0B4J1U4 118 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 A0A0J9YW62 118 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 ZAR1LA6NP61 321 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 RCBTB2O95199 551 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 SOX14O95416 240 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 CRYABP02511 175 aaKnown RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 SFTPCP11686 197 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 BMP7P18075 431 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 POU3F2P20265 443 aaPredicted RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 EPHA2P29317 976 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 SFTPDP35247 375 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 POLR2IP36954 125 aaKnown RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 CLDN18P56856 261 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 IL1RL1Q01638 556 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 C19orf57Q0VDD7 668 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 SGCBQ16585 318 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 ZIK1Q3SY52 487 aaPredicted RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 ZBED5Q49AG3 693 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 VASNQ6EMK4 673 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 SMARCD3Q6STE5 483 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 ATP6V1C2Q8NEY4 427 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 OR8D4Q8NGM9 314 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 OR5J2Q8NH18 312 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 FANK1Q8TC84 345 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 HRASLS5Q96KN8 279 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 OR5B2Q96R09 309 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 GPX7Q96SL4 187 aaPredicted RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 TAPBPLQ9BX59 468 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 PLA2G12AQ9BZM1 189 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 DEFB127Q9H1M4 99 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 OR52D1Q9H346 318 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 RIBC2Q9H4K1 309 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 SLC25A19Q9HC21 320 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 FANCFQ9NPI8 374 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 NDRG4Q9ULP0 352 aaKnown RBP14.5□□□□□ -0.09
SS18-211ENST00000578954 ZNF407Q9C0G0 2248 aa14.5□□□□□ -0.09
SS18-211ENST00000578954 TLN1Q9Y490 2541 aaKnown RBP14.49□□□□□ -0.09
SS18-211ENST00000578954 DNAJC13O75165 2243 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 TRAV27A0A087WT01 109 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 A0A1W2PNR3 127 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 IGFBP1P08833 259 aaPredicted RBP14.49□□□□□ -0.09
SS18-211ENST00000578954 GRPRP30550 384 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 CAPGP40121 348 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 DIO1P49895 249 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 CLDN15P56746 228 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 CLDN20P56880 219 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 NUP107P57740 925 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 PRPS1P60891 318 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 KEAP1Q14145 624 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 OR7A5Q15622 319 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 WLSQ5T9L3 541 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 TTC23Q5W5X9 447 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 ZNF324BQ6AW86 544 aaPredicted RBP14.49□□□□□ -0.09
SS18-211ENST00000578954 USP51Q70EK9 711 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 C10orf53Q8N6V4 93 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 LRRC75AQ8NAA5 344 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 OSTF1Q92882 214 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 ABTB1Q969K4 478 aaPredicted RBP14.49□□□□□ -0.09
SS18-211ENST00000578954 TNFRSF13CQ96RJ3 184 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 EGLN3Q9H6Z9 239 aa14.49□□□□□ -0.09
SS18-211ENST00000578954 LOC100130705A0A1B0GUX0 176 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 M0R082 166 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 ERVH48-1M5A8F1 160 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 AQP7O14520 342 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 NDUFB2O95178 105 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 CPN1P15169 458 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 STARP49675 285 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 P2RY4P51582 365 aa14.48□□□□□ -0.09
SS18-211ENST00000578954 RPS6KA3P51812 740 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms