RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MSANTD1Q6ZTZ1 278 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 AAED1Q7RTV5 226 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 MAVSQ7Z434 540 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 GPAT4Q86UL3 456 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 MUC15Q8N387 334 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 CLIP4Q8N3C7 705 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 C17orf78Q8N4C9 275 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 C1orf162Q8NEQ5 155 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 OR9K2Q8NGE7 335 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 OR9I1Q8NGQ6 314 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMEM45BQ96B21 275 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 AURKBQ96GD4 344 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMEM19Q96HH6 336 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 OR52B2Q96RD2 323 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 SF3B5Q9BWJ5 86 aaKnown RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 CACNG6Q9BXT2 260 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC17A5Q9NRA2 495 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 SDR39U1Q9NRG7 319 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 CBLN4Q9NTU7 201 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 ADPRHL2Q9NX46 363 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 THUMPD1Q9NXG2 353 aaKnown RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 FAM234BA2RU67 622 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 AQP7P3A6NL99 342 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 A8MVM7 634 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 KRT33AO76009 404 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 CDH2P19022 906 aaPredicted RBP13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 NUDT6P53370 316 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZSWIM7Q19AV6 140 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 KLHL24Q6TFL4 600 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 ABHD12BQ7Z5M8 362 aaPredicted RBP13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 MIER2Q8N344 545 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 POMGNT2Q8NAT1 580 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZNF385AQ96PM9 386 aaKnown RBP13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 FKRPQ9H9S5 495 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMBIM4Q9HC24 238 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 IFT52Q9Y366 437 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 ATP23Q9Y6H3 246 aa13.1□□□□□ -0.31
RN7SL560P-201ENST00000577943 DNHD1Q96M86 4753 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 ANK3Q12955 4377 aaKnown RBP13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 FRS3O43559 492 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 CRLF1O75462 422 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 ERLIN1O75477 346 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 WNT11O96014 354 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 PRG2P13727 222 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 PRPS1P60891 318 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 RAB35Q15286 201 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 RGNQ15493 299 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 C11orf71Q6IPW1 123 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 SERPINA11Q86U17 422 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 TLCD1Q96CP7 247 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 SPATA9Q9BWV2 254 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 PIF1Q9H611 641 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 PCDHB14Q9Y5E9 798 aa13.09□□□□□ -0.31
RN7SL560P-201ENST00000577943 A0A096LPI6 279 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 CLIC1O00299 241 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 KLF11O14901 512 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 STX1BP61266 288 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 PRAMEF8Q5VWM4 474 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 PRAMEF7Q5VXH5 474 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 ZNF544Q6NX49 715 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 HTRA1Q92743 480 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 C3orf49Q96BT1 292 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 CHST2Q9Y4C5 530 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
RN7SL560P-201ENST00000577943 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 TLX2O43763 284 aaPredicted RBP13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 CD5LO43866 347 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 VAMP5O95183 116 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 AHSA1O95433 338 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 NUDT7P0C024 238 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 FADDQ13158 208 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 SLC2A7Q6PXP3 512 aa13.07□□□□□ -0.32
RN7SL560P-201ENST00000577943 EPGNQ6UW88 154 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms