RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 P2RY4P51582 365 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 CDH12P55289 794 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 KRTAP10-9P60411 292 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 PSME3P61289 254 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 SLC17A1Q14916 467 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 ENTPD8Q5MY95 495 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 OTUD3Q5T2D3 398 aaPredicted RBP17.14■□□□□ 0.33
SS18-208ENST00000577751 GALNT5Q7Z7M9 940 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 VANGL1Q8TAA9 524 aaPredicted RBP17.14■□□□□ 0.33
SS18-208ENST00000577751 KTI12Q96EK9 354 aaPredicted RBP17.14■□□□□ 0.33
SS18-208ENST00000577751 WFIKKN1Q96NZ8 548 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 TAPBPLQ9BX59 468 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 FANCFQ9NPI8 374 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 EMC3Q9P0I2 261 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 ADAM21Q9UKJ8 722 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 TESMINQ9Y4I5 508 aa17.14■□□□□ 0.33
SS18-208ENST00000577751 A6NNC1 897 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 OR2T1O43869 369 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 THY1P04216 161 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 PSMB1P20618 241 aaKnown RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 EDNRAP25101 427 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 RPS5P46782 204 aaKnown RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 GSK3BP49841 420 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 SELENOWP63302 87 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 CYBRD1Q53TN4 286 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 GKAP1Q5VSY0 366 aaPredicted RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 TSPYL5Q86VY4 417 aaPredicted RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 CARM1Q86X55 608 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 ADAMTS16Q8TE57 1224 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 PROX1Q92786 737 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 LURAP1Q96LR2 239 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 TMEM43Q9BTV4 400 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 SF3B5Q9BWJ5 86 aaKnown RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 ARL8BQ9NVJ2 186 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 ADPRHL2Q9NX46 363 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 SELENONQ9NZV5 590 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 TAGLN3Q9UI15 199 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 PRSS50Q9UI38 385 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 SLC9A8Q9Y2E8 581 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 NOSIPQ9Y314 301 aaKnown RBP17.13■□□□□ 0.33
SS18-208ENST00000577751 SH3GLB1Q9Y371 365 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 FLVCR1Q9Y5Y0 555 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 NAV2Q8IVL1 2488 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 ABCA12Q86UK0 2595 aa17.13■□□□□ 0.33
SS18-208ENST00000577751 CPSF4LA6NMK7 179 aaKnown RBP17.12■□□□□ 0.33
SS18-208ENST00000577751 CHP2O43745 196 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 LYPD3O95274 346 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 CNOT4O95628 575 aaKnown RBP17.12■□□□□ 0.33
SS18-208ENST00000577751 LRRC23Q53EV4 343 aaPredicted RBP17.12■□□□□ 0.33
SS18-208ENST00000577751 FAM69AQ5T7M9 428 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 Q6ZT83 130 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 C22orf34Q6ZV56 151 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 OR6S1Q8NH40 331 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 TAAR8Q969N4 342 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 OR10A4Q9H209 315 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 SPAG4Q9NPE6 437 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 GPR52Q9Y2T5 361 aa17.12■□□□□ 0.33
SS18-208ENST00000577751 NOTCH2Q04721 2471 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 TRAV36DV7A0A075B6V5 113 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 CXCR6O00574 342 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 VAMP5O95183 116 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 GOSR1O95249 250 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 TNFRSF1BP20333 461 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 TMEM225Q6GV28 225 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 P3H2Q8IVL5 708 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 ZIC4Q8N9L1 334 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 OR9K2Q8NGE7 335 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 SLC25A36Q96CQ1 311 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 HDHD5Q9BXW7 423 aa17.11■□□□□ 0.33
SS18-208ENST00000577751 MAST4O15021 2626 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 CSMD2Q7Z408 3487 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 TRAPPC13A5PLN9 417 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 ADAP00813 363 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 PPP3CBP16298 524 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 LTBQ06643 244 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 KRT72Q14CN4 511 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 P2RY6Q15077 328 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 POU4F3Q15319 338 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 SFRP5Q5T4F7 317 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 WDR88Q6ZMY6 472 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 CXorf67Q86X51 503 aaPredicted RBP17.1■□□□□ 0.33
SS18-208ENST00000577751 ZNF100Q8IYN0 542 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 RNF217Q8TC41 542 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 TMEM45BQ96B21 275 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 EPYCQ99645 322 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 KCTD14Q9BQ13 255 aaPredicted RBP17.1■□□□□ 0.33
SS18-208ENST00000577751 PRSS27Q9BQR3 290 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 MED18Q9BUE0 208 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 ZNF426Q9BUY5 554 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 POLR2J2Q9GZM3 115 aaKnown RBP17.1■□□□□ 0.33
SS18-208ENST00000577751 POLR2J3Q9H1A7 115 aaKnown RBP17.1■□□□□ 0.33
SS18-208ENST00000577751 RASD1Q9Y272 281 aa17.1■□□□□ 0.33
SS18-208ENST00000577751 MRPL33O75394 65 aaKnown RBP17.09■□□□□ 0.33
SS18-208ENST00000577751 BGLAPP02818 100 aa17.09■□□□□ 0.33
SS18-208ENST00000577751 OR1E2P47887 323 aa17.09■□□□□ 0.33
SS18-208ENST00000577751 ITGADQ13349 1161 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms