RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ADIPOR2Q86V24 386 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 KDM8Q8N371 416 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 RNF170Q96K19 258 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 ARHGAP9Q9BRR9 750 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 KLK11Q9UBX7 282 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 TRBV5-3A0A0A0MS03 114 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 GAPDHSO14556 408 aaPredicted RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 CCSO14618 274 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 FBXO24O75426 580 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 C5AR1P21730 350 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 BMPR1AP36894 532 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 PXNP49023 591 aaPredicted RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF620Q6ZNG0 422 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 BPIFB2Q8N4F0 458 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 ANKRD53Q8N9V6 530 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 SDHAF3Q9NRP4 125 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 FADS1O60427 444 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 AK1P00568 194 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 TOR2AQ5JU69 321 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 IDO2Q6ZQW0 420 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 LIX1LQ8IVB5 337 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 PLPP7Q8NBV4 271 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 C3orf49Q96BT1 292 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 B3GNT2Q9NY97 397 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 C14orf166Q9Y224 244 aaKnown RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 LDOC1O95751 146 aaPredicted RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 AKAIN1P0CW23 69 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 RPL22L1Q6P5R6 122 aaKnown RBP16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 BADQ92934 168 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 KLHDC7BQ96G42 594 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 ST6GALNAC5Q9BVH7 336 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 BARHL1Q9BZE3 327 aa16.56■□□□□ 0.24
ATPAF1-214ENST00000576409 FITM1A5D6W6 292 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF208O43345 1280 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 CTSLP07711 333 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 CD6P30203 668 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 CCR2P41597 374 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 FAM26DQ5JW98 314 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 SLC18B1Q6NT16 456 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF585AQ6P3V2 769 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TSSK4Q6SA08 328 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 OR7G2Q8NG99 324 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 MFSD8Q8NHS3 518 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF417Q8TAU3 575 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TOMM40LQ969M1 308 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 KIAA1143Q96AT1 154 aaPredicted RBP16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZBTB8AQ96BR9 441 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 DCLRE1CQ96SD1 692 aaKnown RBP16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 NRIP3Q9NQ35 241 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ING1Q9UK53 422 aaPredicted RBP16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 SPTBN2O15020 2390 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 NAP1L6A6NFF2 107 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 RAF1P04049 648 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TRAPPC2P0DI81 140 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TRAPPC2BP0DI82 140 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF28P17035 718 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 BSGP35613 385 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF836Q6ZNA1 936 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 GLB1L2Q8IW92 636 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 LAS2Q8IYD9 372 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 INTS14Q96SY0 518 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 METTL7AQ9H8H3 244 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 IL21Q9HBE4 155 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 A4GNTQ9UNA3 340 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 KCNE1BA0A087WTH5 132 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 LIMS3P0CW19 117 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 LIMS4P0CW20 117 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 RAD52P43351 418 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 REEP5Q00765 189 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 LAIR2Q6ISS4 152 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 PATE1Q8WXA2 126 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TBC1D20Q96BZ9 403 aa16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 TSPAN10Q9H1Z9 355 aaPredicted RBP16.55■□□□□ 0.24
ATPAF1-214ENST00000576409 CACNA1DQ01668 2161 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 SRMP19623 302 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 AWAT2Q6E213 333 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 SIRT6Q8N6T7 355 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 MAFIPQ8WZ33 124 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 ST8SIA2Q92186 375 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 MS4A6EQ96DS6 147 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 C1QTNF6Q9BXI9 259 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 PRRG4Q9BZD6 226 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TPSD1Q9BZJ3 242 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TNFSF12O43508 249 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 HOXB5P09067 269 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 NTSR1P30989 418 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 POU3F4P49335 361 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 CHRFAM7AQ494W8 412 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 COX15Q7KZN9 410 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 SGPP1Q9BX95 441 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 ALKBH4Q9NXW9 302 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 GPR55Q9Y2T6 319 aaPredicted RBP16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TRPM6Q9BX84 2022 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 COL4A5P29400 1685 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms