RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 OR4F21O95013 312 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 FSHBP01225 129 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 IGKV3-15P01624 115 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 IGLV1-44P01699 117 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 HPXP02790 462 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NTF4P34130 210 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 PCGF2P35227 344 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 APOBEC1P41238 236 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 EVX1P49640 407 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 SERPINB9P50453 376 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 RNF144AP50876 292 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 ATP4BP51164 291 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 RPS23P62266 143 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 MRPS25P82663 173 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 HGFACQ04756 655 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 BTKQ06187 659 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 IMPG1Q17R60 797 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NDUFAF6Q330K2 333 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 MMEL1Q495T6 779 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 KLHL26Q53HC5 615 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 SPDYAQ5MJ70 313 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 CEP85LQ5SZL2 805 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 DCST2Q5T1A1 773 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 HHATQ5VTY9 493 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 FAM71E1Q6IPT2 247 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 KRT80Q6KB66 452 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 CDC73Q6P1J9 531 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 C3orf62Q6ZUJ4 267 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZNF551Q7Z340 670 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 RETREG3Q86VR2 466 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 CARM1Q86X55 608 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 IL17RDQ8NFM7 739 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 OR1K1Q8NGR3 316 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 OR4F5Q8NH21 305 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 MAGEE2Q8TD90 523 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZNF483Q8TF39 744 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 DVL3Q92997 716 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 TMEM45BQ96B21 275 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 GIMAP5Q96F15 307 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 OTUB1Q96FW1 271 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 STACQ99469 402 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 CITED1Q99966 193 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 RBM4BQ9BQ04 359 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 NAA11Q9BSU3 229 aaPredicted RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 VPS11Q9H270 941 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZNF385DQ9H6B1 395 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NOX3Q9HBY0 568 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 TMBIM4Q9HC24 238 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 SIRT5Q9NXA8 310 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 DCAF16Q9NXF7 216 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 PLEK2Q9NYT0 353 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NINJ2Q9NZG7 142 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZMAT5Q9UDW3 170 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 CHRNA9Q9UGM1 479 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 MID2Q9UJV3 735 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NUP50Q9UKX7 468 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZNF346Q9UL40 294 aaKnown RBP5.06□□□□□ -1.6
SMG6-219ENST00000575663 STK38LQ9Y2H1 464 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 N6AMT1Q9Y5N5 214 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 NOX1Q9Y5S8 564 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 FLVCR1Q9Y5Y0 555 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 PLCE1Q9P212 2302 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 VWFP04275 2813 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 IGHV2OR16-5A0A0B4J2B6 119 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 EXOC1LA0A1B0GW35 172 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 A0A1W2PPW3 197 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 SLC22A31A6NKX4 558 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CLDN25C9JDP6 229 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 RGS16O15492 202 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 DEAF1O75398 565 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 SKAP2O75563 359 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 LGI1O95970 557 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CSTAP01040 98 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 IGHV2-5P01817 119 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CRYBA1P05813 215 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 KRT16P08779 473 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 IGFBP1P08833 259 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 HOXB1P14653 301 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 CHN1P15882 459 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TSPAN8P19075 237 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TCN1P20061 433 aaPredicted RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 COL8A2P25067 703 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ARR3P36575 388 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 RBMXP38159 391 aaKnown RBP5.05□□□□□ -1.6
SMG6-219ENST00000575663 RAD52P43351 418 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ALDH3B1P43353 468 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 MTNR1AP48039 350 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 MNAT1P51948 309 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 ATP12AP54707 1039 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 CDH13P55290 713 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 RAG2P55895 527 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 OR2B6P58173 313 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TUBA1BP68363 451 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TUBA4AP68366 448 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 SLC35A1P78382 337 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 TEKQ02763 1124 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 MVKQ03426 396 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 COX10Q12887 443 aa5.05□□□□□ -1.6
SMG6-219ENST00000575663 NPRL3Q12980 569 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms