RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ADAMTS16Q8TE57 1224 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ASZ1Q8WWH4 475 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 TAF15Q92804 592 aaKnown RBP eCLIP1.71□□□□□ -2.14
CHD3-217ENST00000574022 ASB9Q96DX5 294 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SEC22AQ96IW7 307 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 JSRP1Q96MG2 331 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 OXGR1Q96P68 337 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OPALINQ96PE5 141 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SLC29A1Q99808 456 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 KCNS3Q9BQ31 491 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MCRIP2Q9BUT9 160 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 MFFQ9GZY8 342 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR2AG1Q9H205 316 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 PARLQ9H300 379 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR51M1Q9H341 326 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CAB39LQ9H9S4 337 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MYOZ2Q9NPC6 264 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SAMSN1Q9NSI8 373 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 GPATCH2LQ9NWQ4 482 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IFNKQ9P0W0 207 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 STOX2Q9P2F5 926 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 THAP10Q9P2Z0 257 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 RNF7Q9UBF6 113 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CLN8Q9UBY8 286 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 RIMS3Q9UJD0 308 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ANGPTL2Q9UKU9 493 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FLVCR2Q9UPI3 526 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MRPS28Q9Y2Q9 187 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 RPL36Q9Y3U8 105 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 NCANO14594 1321 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 IGLV4-3A0A075B6K6 122 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 LOC100131303A0A0U1RQF7 123 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 A0A1B0GWB2 263 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 RPL37AP8A6NKH3 93 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 FOXI3A8MTJ6 420 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 G3V3Y1 287 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GFYI3L273 518 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 M0R3G1 203 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 NDUFAB1O14561 156 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GOSR2O14653 212 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 PPP1R2P9O14990 202 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CHST1O43916 411 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 AIREO43918 545 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SOX15O60248 233 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GPX5O75715 221 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 NOL4O94818 638 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 YEATS4O95619 227 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 POP4O95707 220 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 TSPAN13O95857 204 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ALDOBP05062 364 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SERPINE2P07093 398 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 HCKP08631 526 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZSCAN5DPP0CG00 497 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SNHG28P0DPA3 235 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 DPEP1P16444 411 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 HOXB8P17481 243 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZNF10P21506 573 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 DCKP27707 260 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 FOXN2P32314 431 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SLC1A1P43005 524 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ALDH3B2P48448 385 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GSSP48637 474 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CCNHP51946 323 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 ARHGDIBP52566 201 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 HMGA2P52926 109 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 HMGCS2P54868 508 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 PSMD4P55036 377 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 FBXW4P57775 412 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GNB1P62873 340 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ERVK-25P63136 954 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TNNC1P63316 161 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZFP36L1Q07352 338 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 SLC10A7Q0GE19 358 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CDH17Q12864 832 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SLAQ13239 276 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 RCAN2Q14206 197 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ABRAXAS2Q15018 415 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CYTH1Q15438 398 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SIX1Q15475 284 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 MICAQ29983 383 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 C17orf58Q2M2W7 97 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZNF876PQ49A33 203 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SLC22A6Q4U2R8 563 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SOHLH1Q5JUK2 328 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 PPM1LQ5SGD2 360 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 C6orf183Q5T699 404 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 OR52E8Q6IFG1 317 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 H3F3CQ6NXT2 135 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 EMBQ6PCB8 327 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 RFWD3Q6PCD5 774 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TTC23LQ6PF05 361 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 DEGS2Q6QHC5 323 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CERS6Q6ZMG9 384 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ASCL5Q7RTU5 278 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 MRPL21Q7Z2W9 205 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 HDDC2Q7Z4H3 204 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 LRRTM1Q86UE6 522 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 COMTD1Q86VU5 262 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SPATA24Q86W54 205 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CATSPER3Q86XQ3 398 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms