RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SLC9A8Q9Y2E8 581 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 USH1CQ9Y6N9 552 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 SVEP1Q4LDE5 3571 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 FAM234BA2RU67 622 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 PTAFRP25105 342 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 TTKP33981 857 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 EGR4Q05215 589 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 GNA13Q14344 377 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 RGNQ15493 299 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 WBP2NLQ6ICG8 309 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 TMEM108Q6UXF1 575 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 MSANTD1Q6ZTZ1 278 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 EPHX4Q8IUS5 362 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 ZNF440Q8IYI8 595 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 ITCHQ96J02 903 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 EBF4Q9BQW3 602 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 PTDSS2Q9BVG9 487 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 SLCO1B3Q9NPD5 702 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 NKIRAS1Q9NYS0 192 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 DCTN4Q9UJW0 460 aa15.86■□□□□ 0.13
CHD3-214ENST00000572579 IGHV4-30-2A0A087WSY4 118 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 A0A0G2JPF8 293 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 TMEM229AB2RXF0 380 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 HNRNPCL2B2RXH8 293 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 HNRNPCL3B7ZW38 293 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 M0R1B8 84 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 HNRNPCL1O60812 293 aaKnown RBP15.85■□□□□ 0.13
CHD3-214ENST00000572579 GPIP06744 558 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 HNRNPCL4P0DMR1 293 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 BMP2P12643 396 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 CXCR1P25024 350 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 CRISP3P54108 245 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 ETFDHQ16134 617 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 OR7E24Q6IFN5 339 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 SLC22A25Q6T423 547 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 SSX8Q7RTT4 187 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 MIER2Q8N344 545 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 KDM8Q8N371 416 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 RADILQ96JH8 1075 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 DHRS9Q9BPW9 319 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 SF3B5Q9BWJ5 86 aaKnown RBP15.85■□□□□ 0.13
CHD3-214ENST00000572579 PRR14Q9BWN1 585 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 SPATA9Q9BWV2 254 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 CACNG6Q9BXT2 260 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 BCL2L10Q9HD36 194 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 PARPBPQ9NWS1 579 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 SEC14L4Q9UDX3 406 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 ATRQ13535 2644 aa15.85■□□□□ 0.13
CHD3-214ENST00000572579 A8MVM7 634 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 FTCDNL1E5RQL4 147 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 CLIC1O00299 241 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 GPRIN2O60269 458 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 ANP32DO95626 131 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 MPGP29372 298 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 MRPL19P49406 292 aaKnown RBP15.84■□□□□ 0.13
CHD3-214ENST00000572579 SELENOPP49908 381 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 IDH3AP50213 366 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 MST1LQ2TV78 715 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 HIKESHIQ53FT3 197 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 PAGE3Q5JUK9 113 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 C6orf10Q5SRN2 563 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 C1orf140Q5VVS0 124 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 CREB3L2Q70SY1 520 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 AAED1Q7RTV5 226 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 OR10H5Q8NGA6 315 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 BOD1Q96IK1 185 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 WFDC6Q9BQY6 131 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 IKZF5Q9H5V7 419 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 A4GALTQ9NPC4 353 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 CALML5Q9NZT1 146 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 UPB1Q9UBR1 384 aa15.84■□□□□ 0.13
CHD3-214ENST00000572579 SSX4O60224 188 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 CRLF1O75462 422 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 HTR2AP28223 471 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 AGAP6Q5VW22 663 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 GPAT4Q86UL3 456 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 C1orf162Q8NEQ5 155 aaPredicted RBP15.83■□□□□ 0.12
CHD3-214ENST00000572579 KTI12Q96EK9 354 aaPredicted RBP15.83■□□□□ 0.12
CHD3-214ENST00000572579 RMND5AQ9H871 391 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 CBLN4Q9NTU7 201 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 ADPRHL2Q9NX46 363 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 MGAT4BQ9UQ53 548 aa15.83■□□□□ 0.12
CHD3-214ENST00000572579 TRBV5-3A0A0A0MS03 114 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 TPST1O60507 370 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 UPK3AO75631 287 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 LGI1O95970 557 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 UQCRBP14927 111 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 CDH2P19022 906 aaPredicted RBP15.82■□□□□ 0.12
CHD3-214ENST00000572579 LARS2Q15031 903 aaKnown RBP15.82■□□□□ 0.12
CHD3-214ENST00000572579 GLIPR1L2Q4G1C9 344 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 ZNF311Q5JNZ3 666 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 LRIF1Q5T3J3 769 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 BLOC1S3Q6QNY0 202 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 KLHL17Q6TDP4 642 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 MUC15Q8N387 334 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 C17orf78Q8N4C9 275 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 C7orf26Q96N11 449 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 NELFAQ9H3P2 528 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 ALG2Q9H553 416 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms