RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OR10H2O60403 315 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 APODP05090 189 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TACSTD2P09758 323 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 MFSD13AQ14CX5 517 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF776Q68DI1 518 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 FBXO42Q6P3S6 717 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ULK3Q6PHR2 472 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 UNQ9370/PRO34162Q6UXP9 181 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 Q6ZTK2 550 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SLC35F3Q8IY50 421 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 YAF2Q8IY57 180 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SYNPRQ8TBG9 265 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 PAWRQ96IZ0 340 aaKnown RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SFXN2Q96NB2 322 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SEC22CQ9BRL7 303 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 PFDN2Q9UHV9 154 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 A0A1B0GTQ1 180 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ACOD1A6NK06 481 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 GNB5O14775 395 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TSPAN9O75954 239 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CALCBP10092 127 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CPN1P15169 458 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SDHBP21912 280 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ENPP1P22413 925 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TCEA2Q15560 299 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 OLFML2AQ68BL7 652 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TMEM65Q6PI78 240 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 RD3Q7Z3Z2 195 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 OR10G6Q8NH81 332 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 MOSPD2Q8NHP6 518 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 LCORQ96JN0 433 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ASB16Q96NS5 453 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 POT1Q9NUX5 634 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TAS2R5Q9NYW4 299 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 COQ3Q9NZJ6 369 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 FLRT3Q9NZU0 649 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SERGEFQ9UGK8 458 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CHRNA9Q9UGM1 479 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SLC31A1O15431 190 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 CFDP00746 253 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 HRGP04196 525 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 NFYAP23511 347 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 IGFALSP35858 605 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 RAD52P43351 418 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 PRRT3Q5FWE3 981 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 SLC6A19Q695T7 634 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 KIAA1324Q6UXG2 1013 aaKnown RBP9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ARSGQ96EG1 525 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 OR2A5Q96R48 311 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 LIN7BQ9HAP6 207 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 ENTPD2Q9Y5L3 495 aa9.89□□□□□ -0.83
CCDC40-207ENST00000572253 TRBV23OR9-2A0A075B6M9 112 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 PCP4L1A6NKN8 68 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 SNRPGP15A8MWD9 76 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 P2RX6O15547 441 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 FGF17O60258 216 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 IL5P05113 134 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 SMIM10L1P0DMW3 83 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ATF4P18848 351 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ITGB8P26012 769 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 RPS11P62280 158 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 HTR4Q13639 388 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 FAM199XQ6PEV8 388 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 LRRN1Q6UXK5 716 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 DPY19L2P2Q6ZN68 376 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 KANSL1Q7Z3B3 1105 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 GLRX5Q86SX6 157 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 SMIM10Q96HG1 83 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 FGF22Q9HCT0 170 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 FBXL3Q9UKT7 428 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ETV7Q9Y603 341 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3DA0A087WVF3 549 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3IA0A087WXS9 549 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ANKRD20A5PA0PJZ0 165 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 PRSS38A1L453 326 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3LB9A6J9 549 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 LDOC1O95751 146 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 POU2F2P09086 479 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3HP0C7X1 549 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 UBL4AP11441 157 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 NUP62P37198 522 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 PXDC1Q5TGL8 231 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3CQ6IPX1 549 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D3Q8IZP1 549 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 GCDHQ92947 438 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TM4SF19Q96DZ7 209 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ZFYVE21Q9BQ24 234 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 TBC1D29Q9UFV1 150 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 ICAM5Q9UMF0 924 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 SNRNP200O75643 2136 aaKnown RBP9.88□□□□□ -0.83
CCDC40-207ENST00000572253 PRR19A6NJB7 356 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 SELENOFO60613 162 aa9.88□□□□□ -0.83
CCDC40-207ENST00000572253 RP2O75695 350 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms