RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SIRT6Q8N6T7 355 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF321PQ8N8H1 164 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 GDPD1Q8N9F7 314 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 Q8N9G6 341 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 EXD3Q8N9H8 876 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 POMGNT2Q8NAT1 580 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NFAM1Q8NET5 270 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ATP6V1C2Q8NEY4 427 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR4D9Q8NGE8 314 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR51G2Q8NGK0 314 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR6S1Q8NH40 331 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR5W2Q8NH69 310 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SETD6Q8TBK2 473 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PHOSPHO1Q8TCT1 267 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CHAC2Q8WUX2 184 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ACOT12Q8WYK0 555 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SMPDL3BQ92485 455 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PHYHIPQ92561 330 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 AP3S1Q92572 193 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NINJ1Q92982 152 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TSLPQ969D9 159 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ABTB1Q969K4 478 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 KIAA1143Q96AT1 154 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ARSGQ96EG1 525 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZC3H10Q96K80 434 aaKnown RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ERMAPQ96PL5 475 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SDHCQ99643 169 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NEURL2Q9BR09 285 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ALG8Q9BVK2 526 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 YIPF2Q9BWQ6 316 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR8D2Q9GZM6 311 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 VN1R1Q9GZP7 353 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 WWTR1Q9GZV5 400 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZCCHC4Q9H5U6 513 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 MED20Q9H944 212 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SMURF1Q9HCE7 757 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SLC22A11Q9NSA0 550 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 FGF21Q9NSA1 209 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SNTG1Q9NSN8 517 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 DAPK2Q9UIK4 370 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 MOKQ9UQ07 419 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 HIF3AQ9Y2N7 669 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CMAHPQ9Y471 501 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PCDHGB2Q9Y5G2 931 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 IER3IP1Q9Y5U9 82 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 U3KQA8 63 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TDRD6O60522 2096 aaKnown RBP4.9□□□□□ -1.62
SF3B3-213ENST00000569687 ARPC4-TTLL3A0A0A6YYG9 625 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 A0A1W2PQM1 296 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 OR6C68A6NDL8 312 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ANKRD61A6NGH8 418 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ELOA3DA6NLF2 546 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 A8MUA0 341 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ADAM10O14672 748 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 TBX1O43435 398 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CDC40O60508 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM127O75204 238 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 REM1O75628 298 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 SC5DO75845 299 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 GLCEO94923 617 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 HTR3BO95264 441 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 GHRHP01286 108 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 HIST1H1CP16403 213 aaKnown RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 MST1P26927 711 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 NOS3P29474 1203 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 UQCRC1P31930 480 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 HOXD12P35452 270 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 GRK6P43250 576 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 PPM1FP49593 454 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 NRG3P56975 720 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 DEFA1P59665 94 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 DEFA3P59666 94 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CCL7P80098 99 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CSTF1Q05048 431 aaKnown RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 EGR4Q05215 589 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 LTBQ06643 244 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 RIN1Q13671 783 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ATP1A4Q13733 1029 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 EFR3AQ14156 821 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 HLA-BQ31612 363 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 NDUFAF6Q330K2 333 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF791Q3KP31 576 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ELOA3BQ3SY89 546 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CDONQ4KMG0 1287 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CCDC58Q4VC31 144 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 KLHL12Q53G59 568 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 PERM1Q5SV97 790 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 ARHGAP40Q5TG30 622 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 LCN1P1Q5VSP4 162 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 PRAMEF17Q5VTA0 474 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 HLA-DQA1Q5Y7H0 255 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 GPR139Q6DWJ6 353 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 DMKNQ6E0U4 476 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 FAAH2Q6GMR7 532 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.63
SF3B3-213ENST00000569687 CBLN3Q6UW01 205 aa4.9□□□□□ -1.63
SF3B3-213ENST00000569687 PAMR1Q6UXH9 720 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms