RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 MTPNP58546 118 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 NKX6-1P78426 367 aaPredicted RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 EGR4Q05215 589 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 FOXD4Q12950 439 aaPredicted RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 SELPLGQ14242 412 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 PPA1Q15181 289 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 STK11Q15831 433 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 ELOA3BQ3SY89 546 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 SHEQ5VZ18 495 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 TMEM225Q6GV28 225 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 CASP12Q6UXS9 341 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 NET1Q7Z628 596 aaPredicted RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 KRTAP1-3Q8IUG1 177 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 ARMC8Q8IUR7 673 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 ELOA3Q8NG57 546 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 OR9K2Q8NGE7 335 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 MFSD8Q8NHS3 518 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 DNAJA4Q8WW22 397 aaPredicted RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 PTDSS2Q9BVG9 487 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 TRIM2Q9C040 744 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 KAT8Q9H7Z6 458 aaKnown RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 ADPRHL2Q9NX46 363 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 TESQ9UGI8 421 aaKnown RBP17.89■□□□□ 0.45
CLK3-225ENST00000569063 RNF115Q9Y4L5 304 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 ITPR3Q14573 2671 aa17.89■□□□□ 0.45
CLK3-225ENST00000569063 TEP1Q99973 2627 aaKnown RBP17.88■□□□□ 0.45
CLK3-225ENST00000569063 A0A1B0GWA3 101 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 FBP2O00757 339 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 FZD7O75084 574 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 VAMP5O95183 116 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 AHSA1O95433 338 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 CD3EP07766 207 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 ARFIP2P53365 341 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 DMTNQ08495 405 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 FAPQ12884 760 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 CYP51A1Q16850 503 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 FAM91A1Q658Y4 838 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 OR7E24Q6IFN5 339 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 CGB2Q6NT52 195 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 ULK3Q6PHR2 472 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 ZNF611Q8N823 705 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 WFDC11Q8NEX6 87 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 OR52E4Q8NGH9 312 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 MUS81Q96NY9 551 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 ZNF385AQ96PM9 386 aaKnown RBP17.88■□□□□ 0.45
CLK3-225ENST00000569063 CCDC134Q9H6E4 229 aa17.88■□□□□ 0.45
CLK3-225ENST00000569063 CIB4A0PJX0 185 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 DPRXA6NFQ7 191 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 CCT8L1PA6NM43 557 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 RAD51DO75771 328 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 ITGA5P08648 1049 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 VIMP08670 466 aaKnown RBP17.87■□□□□ 0.45
CLK3-225ENST00000569063 PNMTP11086 282 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 GUCY1A3Q02108 690 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 HSP90B2PQ58FF3 399 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 COQ5Q5HYK3 327 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 ALG10BQ5I7T1 473 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 TSPO2Q5TGU0 170 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 C5orf46Q6UWT4 87 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 AAED1Q7RTV5 226 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 GPAT4Q86UL3 456 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 SLC30A8Q8IWU4 369 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 LILRB1Q8NHL6 650 aaPredicted RBP17.87■□□□□ 0.45
CLK3-225ENST00000569063 AKAP1Q92667 903 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLK3-225ENST00000569063 KTI12Q96EK9 354 aaPredicted RBP17.87■□□□□ 0.45
CLK3-225ENST00000569063 PRR14Q9BWN1 585 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 DLL4Q9NR61 685 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 SLC7A10Q9NS82 523 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 UPB1Q9UBR1 384 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 SLC13A4Q9UKG4 626 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 RASD1Q9Y272 281 aa17.87■□□□□ 0.45
CLK3-225ENST00000569063 ARHGEF9O43307 516 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 OR2T1O43869 369 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 TMCC2O75069 709 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 C8BP07358 591 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 RPS5P46782 204 aaKnown RBP17.86■□□□□ 0.45
CLK3-225ENST00000569063 GZMMP51124 257 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 FOXG1P55316 489 aaPredicted RBP17.86■□□□□ 0.45
CLK3-225ENST00000569063 RGS8P57771 180 aaPredicted RBP17.86■□□□□ 0.45
CLK3-225ENST00000569063 BSPH1Q075Z2 132 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
CLK3-225ENST00000569063 GABRA6Q16445 453 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 TRMT5Q32P41 509 aaKnown RBP17.86■□□□□ 0.45
CLK3-225ENST00000569063 CREB3L2Q70SY1 520 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 SLC38A4Q969I6 547 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 SLC47A1Q96FL8 570 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 WFDC6Q9BQY6 131 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 AMBRA1Q9C0C7 1298 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 MED4Q9NPJ6 270 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 SAR1AQ9NR31 198 aa17.86■□□□□ 0.45
CLK3-225ENST00000569063 IGKV1D-42A0A075B6H8 117 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 M0QX08 132 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 TPST2O60704 377 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 LGI1O95970 557 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 NPPAP01160 153 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 FOSL1P15407 271 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 PAX1P15863 534 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 PCGF2P35227 344 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 NCALDP61601 193 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 KLF10Q13118 480 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms