RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CPTPQ5TA50 214 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 TTC19Q6DKK2 380 aaPredicted RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 ABLIM2Q6H8Q1 611 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 Q6ZT83 130 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 Q6ZWC4 215 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 RAPH1Q70E73 1250 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 CMC1Q7Z7K0 106 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 TBC1D1Q86TI0 1168 aaPredicted RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 TDRPQ86YL5 185 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 ZBED8Q8IZ13 594 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 GTPBP8Q8N3Z3 284 aaPredicted RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 SPC24Q8NBT2 197 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 ZFAND2BQ8WV99 257 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 ATP6V1E2Q96A05 226 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 EXOSC8Q96B26 276 aaKnown RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 REXO5Q96IC2 774 aaKnown RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 RNF145Q96MT1 663 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 FOXN4Q96NZ1 517 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 CPNE1Q99829 537 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 ARPC5LQ9BPX5 153 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 INPP5KQ9BT40 448 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 FAIM2Q9BWQ8 316 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 SRXN1Q9BYN0 137 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 TBL1XR1Q9BZK7 514 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 FARSBQ9NSD9 589 aaKnown RBP4.91□□□□□ -1.62
CDH13-211ENST00000568770 SENP1Q9P0U3 644 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 SLC12A4Q9UP95 1085 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 MGAT4BQ9UQ53 548 aa4.91□□□□□ -1.62
CDH13-211ENST00000568770 A0A087WV62 115 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 A0A087WZY1 265 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 IGHV3-15A0A0B4J1V0 119 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 A0A0G2JK05 382 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 LOC390937A0A1W2PQ73 354 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 A0A1W2PRB8 838 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 OR5H1A6NKK0 313 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 C9JVG2 144 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 E7ESA3 106 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 SMAD9O15198 467 aaKnown RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 TP73O15350 636 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 PLOD3O60568 738 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 COQ9O75208 318 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 NXPH3O95157 252 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 PDYNP01213 254 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 IL3P08700 152 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 DHRS4L1P0CG22 281 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CREB1P16220 341 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ZNF23P17027 643 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 GGT1P19440 569 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 IGHV1-2P23083 117 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 FPR3P25089 353 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 EDNRAP25101 427 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 SPRP35270 261 aaPredicted RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 GP5P40197 560 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 OR3A2P47893 321 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ZNF83P51522 516 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ZNF41P51814 821 aaPredicted RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 CCNG1P51959 295 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CHRNB3Q05901 458 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 BTKQ06187 659 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 IFT88Q13099 833 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CARTPTQ16568 116 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 GRAMD1BQ3KR37 738 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 FAM219BQ5XKK7 198 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ZNF544Q6NX49 715 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 KLHL17Q6TDP4 642 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 FCRLAQ7L513 359 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 SSX8Q7RTT4 187 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 TRABD2AQ86V40 505 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 P2RY8Q86VZ1 359 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CENPLQ8N0S6 344 aaPredicted RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 C1orf52Q8N6N3 182 aaKnown RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 OR52N5Q8NH56 324 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 RHEBL1Q8TAI7 183 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 FAM110BQ8TC76 370 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ACTRT1Q8TDG2 376 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 KCTD4Q8WVF5 259 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CDKL2Q92772 493 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CPNE4Q96A23 557 aaPredicted RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 KLHL15Q96M94 604 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 KLHDC3Q9BQ90 382 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 TRMOQ9BU70 441 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 DPCDQ9BVM2 203 aaPredicted RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ELOVL6Q9H5J4 265 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 TIGARQ9NQ88 270 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 MED17Q9NVC6 651 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 ASB6Q9NWX5 421 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 CPSF2Q9P2I0 782 aaKnown RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 MRTO4Q9UKD2 239 aaKnown RBP4.9□□□□□ -1.63
CDH13-211ENST00000568770 FKBP7Q9Y680 259 aa4.9□□□□□ -1.63
CDH13-211ENST00000568770 NUP214P35658 2090 aaPredicted RBP4.89□□□□□ -1.63
CDH13-211ENST00000568770 NPIPA5A0A0B4J1W7 369 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 A0A1W2PR80 420 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 TCRBV9S1A1TA0A576 114 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 GXYLT2A0PJZ3 443 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 TMEM89A2RUT3 159 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 SERINC4A6NH21 518 aa4.89□□□□□ -1.63
CDH13-211ENST00000568770 FAM159BA6NKW6 160 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms