RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 UBE2V2Q15819 145 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CDKN3Q16667 212 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CYBRD1Q53TN4 286 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SPECC1LQ69YQ0 1117 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 C6orf89Q6UWU4 347 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 LRRC31Q6UY01 552 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 RGS9BPQ6ZS82 235 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SMIM5Q71RC9 77 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 TRMT10CQ7L0Y3 403 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 P4HA3Q7Z4N8 544 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 AKAP14Q86UN6 197 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 NKAIN4Q8IVV8 208 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC34A3Q8N130 599 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CSNK1A1LQ8N752 337 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 LINC01006Q8NI28 216 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 MAIP1Q8WWC4 291 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 C7orf34Q96L11 122 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CCDC42Q96M95 316 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 TSNARE1Q96NA8 513 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SECISBP2Q96T21 854 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PLIN2Q99541 437 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SIKE1Q9BRV8 207 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 TSSK1BQ9BXA7 367 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PARD6BQ9BYG5 372 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CCSER1Q9C0I3 900 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 FAM192AQ9GZU8 254 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 ABCG8Q9H221 673 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SYNDIG1Q9H7V2 258 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 UCK1Q9HA47 277 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PDFQ9HBH1 243 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 DMAP1Q9NPF5 467 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SDHAF3Q9NRP4 125 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 DDX18Q9NVP1 670 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GDAP2Q9NXN4 497 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 MRPL39Q9NYK5 338 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 EHFQ9NZC4 300 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 NINJ2Q9NZG7 142 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PTBP2Q9UKA9 531 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 VANGL2Q9ULK5 521 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PLA2G4CQ9UP65 541 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CFL2Q9Y281 166 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 C15orf41Q9Y2V0 281 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CHTOPQ9Y3Y2 248 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 L3MBTL1Q9Y468 752 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 USP42Q9H9J4 1324 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PSME4Q14997 1843 aa2.65□□□□□ -1.98
HERPUD1-212ENST00000567944 MRC1P22897 1456 aa2.65□□□□□ -1.98
HERPUD1-212ENST00000567944 RAB3GAP2Q9H2M9 1393 aa2.65□□□□□ -1.98
HERPUD1-212ENST00000567944 ZSCAN5BA6NJL1 495 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 HSBP1L1C9JCN9 74 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 H0YCG3 227 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 H0YIV9 168 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 K7ENP7 123 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 HIP1O00291 1037 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ZW10O43264 779 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 PPIHO43447 177 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TOM1L1O75674 476 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 SERF1AO75920 110 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TRIM16O95361 564 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 IFNA14P01570 189 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 HEXBP07686 556 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 H2AFZP0C0S5 128 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ETS1P14921 441 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 HPGDP15428 266 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 GAP43P17677 238 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 XRCC1P18887 633 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TSPAN8P19075 237 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ALDH3A1P30838 453 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 RFC4P35249 363 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CD86P42081 329 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TSPAN5P62079 268 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 UBE2IP63279 158 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CCNA1P78396 465 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 IL9RQ01113 521 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CUL2Q13617 745 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 DOC2AQ14183 400 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CYP51A1Q16850 503 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 KLHL40Q2TBA0 621 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TTMPQ5BVD1 217 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TTC23LQ6PF05 361 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 Q7L0L9 218 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC51BQ86UW2 128 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF619Q8N2I2 560 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 OR6C4Q8NGE1 309 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 OR56B1Q8NGI3 324 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 PEX13Q92968 403 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 LRRC39Q96DD0 335 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ANKRD36BP1Q96IX9 119 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 SAMD8Q96LT4 415 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TECTBQ96PL2 329 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CENPKQ9BS16 269 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 SPXQ9BT56 116 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 TMEM121Q9BTD3 319 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 CRNKL1Q9BZJ0 848 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 NMNAT2Q9BZQ4 307 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 NDEL1Q9GZM8 345 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ATG10Q9H0Y0 220 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 GLT8D2Q9H1C3 349 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms