RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 Q6P435 159 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 NLRP9Q7RTR0 991 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 SLC35F2Q8IXU6 374 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 PNKDQ8N490 385 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 MFSD9Q8NBP5 474 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 FGF11Q92914 225 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 IL22RA2Q969J5 263 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 EFHD2Q96C19 240 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 CHRDL1Q9BU40 450 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 MTRF1LQ9UGC7 380 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 ASF1AQ9Y294 204 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 MRPS7Q9Y2R9 242 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 ARID1AO14497 2285 aa3.04□□□□□ -1.92
SHCBP1-206ENST00000567698 MAGEB3O15480 346 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 N4BP1O75113 896 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 AP2A1O95782 977 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 IGHV4-34P06331 123 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 HOXC4P09017 264 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 ZNF44P15621 663 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 RFC4P35249 363 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 DUSP3P51452 185 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 KPNA2P52292 529 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 CRYBB1P53674 252 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 DLX1P56177 255 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 PRPS1P60891 318 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 TIMM10P62072 90 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 HMGN5P82970 282 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 SPIBQ01892 262 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 UNC119Q13432 240 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 MPPED2Q15777 294 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 PAGE3Q5JUK9 113 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 RGS9BPQ6ZS82 235 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 COX15Q7KZN9 410 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 GDPD3Q7L5L3 318 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 MFSD6LQ8IWD5 586 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 ARPC1AQ92747 370 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 CMTM7Q96FZ5 175 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 SLC38A2Q96QD8 506 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 KCNA7Q96RP8 456 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 RNF2Q99496 336 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 NRIP2Q9BQI9 281 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 MRPL45Q9BRJ2 306 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 PARD6BQ9BYG5 372 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 YY1AP1Q9H869 796 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 GORASP2Q9H8Y8 452 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 SLC25A22Q9H936 323 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 HOXC10Q9NYD6 342 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 C6orf203Q9P0P8 240 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 PTBP2Q9UKA9 531 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 SNX6Q9UNH7 406 aa3.03□□□□□ -1.92
SHCBP1-206ENST00000567698 TRAV26-1A0A087WT03 109 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 A0A1B0GUA9 196 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 HSD17B6O14756 317 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 RGS16O15492 202 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 PALMO75781 387 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 PRDX3P30048 256 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 GRIA1P42261 906 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 RPS10P46783 165 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 IFNAR2P48551 515 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 SELENOTP62341 195 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 DUSP7Q16829 419 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 PARP15Q460N3 678 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 ATAD3BQ5T9A4 648 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 OR4F3Q6IEY1 312 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 OR52E8Q6IFG1 317 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 PGAP1Q75T13 922 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 RNF175Q8N4F7 328 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 FAM71E2Q8N5Q1 922 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 FAM151AQ8WW52 585 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 UCN3Q969E3 161 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 UBE2E3Q969T4 207 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 SEC22AQ96IW7 307 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 P2RY13Q9BPV8 354 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 ANP32EQ9BTT0 268 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 RAB34Q9BZG1 259 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 OR11A1Q9GZK7 315 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 RNF167Q9H6Y7 350 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 CLCF1Q9UBD9 225 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 ZNF225Q9UK10 706 aa3.02□□□□□ -1.93
SHCBP1-206ENST00000567698 KIR2DL5BA0A0G2JN68 375 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 KIR2DL5BA0A0G2JPC4 375 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 CLRN2A0PK11 232 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 GJE1A6NN92 205 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 TRIM49D1C9J1S8 452 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 BOLA2-SMG1P6H3BVE0 249 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 AP3B1O00203 1094 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 NBR2O15453 112 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 KLHL41O60662 606 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 DIRAS1O95057 198 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 POU2F1P14859 743 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 NCK1P16333 377 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 BTCP35070 178 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 PRPHP41219 470 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 LHX2P50458 406 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 TAS2R19P59542 299 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 ACTR1AP61163 376 aa3.01□□□□□ -1.93
SHCBP1-206ENST00000567698 TNFRSF17Q02223 184 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms