RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 OR5L2Q8NGL0 311 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 FANK1Q8TC84 345 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 BRSK1Q8TDC3 778 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 STARD8Q92502 1023 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 RAPGEF5Q92565 580 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 NDRG1Q92597 394 aaKnown RBP2.59□□□□□ -1.99
UBR1-205ENST00000564540 ARPC1AQ92747 370 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 TUBGCP3Q96CW5 907 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 TTC25Q96NG3 672 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 SLC6A7Q99884 636 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 VPS37BQ9H9H4 285 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 EML4Q9HC35 981 aaKnown RBP2.59□□□□□ -1.99
UBR1-205ENST00000564540 TM9SF3Q9HD45 589 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 NMRK1Q9NWW6 199 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 V9GY05 133 aa2.59□□□□□ -1.99
UBR1-205ENST00000564540 PCM1Q15154 2024 aa2.58□□□□□ -2
UBR1-205ENST00000564540 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
UBR1-205ENST00000564540 E7ESA3 106 aa2.58□□□□□ -2
UBR1-205ENST00000564540 SGK1O00141 431 aa2.58□□□□□ -2
UBR1-205ENST00000564540 XPO1O14980 1071 aaKnown RBP2.58□□□□□ -2
UBR1-205ENST00000564540 MAGEB3O15480 346 aa2.58□□□□□ -2
UBR1-205ENST00000564540 AIREO43918 545 aa2.58□□□□□ -2
UBR1-205ENST00000564540 OR4F21O95013 312 aa2.58□□□□□ -2
UBR1-205ENST00000564540 RETP07949 1114 aa2.58□□□□□ -2
UBR1-205ENST00000564540 PLEKP08567 350 aaPredicted RBP2.58□□□□□ -2
UBR1-205ENST00000564540 IQCF3P0C7M6 154 aa2.58□□□□□ -2
UBR1-205ENST00000564540 ICAM2P13598 275 aa2.58□□□□□ -2
UBR1-205ENST00000564540 PAX7P23759 505 aa2.58□□□□□ -2
UBR1-205ENST00000564540 GDI1P31150 447 aa2.58□□□□□ -2
UBR1-205ENST00000564540 SPIBQ01892 262 aa2.58□□□□□ -2
UBR1-205ENST00000564540 GBE1Q04446 702 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CUL2Q13617 745 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CCDC57Q2TAC2 916 aa2.58□□□□□ -2
UBR1-205ENST00000564540 SLC36A3Q495N2 470 aa2.58□□□□□ -2
UBR1-205ENST00000564540 PIGGQ5H8A4 983 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CFAP157Q5JU67 520 aa2.58□□□□□ -2
UBR1-205ENST00000564540 ZNF621Q6ZSS3 439 aa2.58□□□□□ -2
UBR1-205ENST00000564540 ZDHHC21Q8IVQ6 265 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CDH26Q8IXH8 852 aa2.58□□□□□ -2
UBR1-205ENST00000564540 GCNT2Q8N0V5 402 aa2.58□□□□□ -2
UBR1-205ENST00000564540 STEAP2Q8NFT2 490 aa2.58□□□□□ -2
UBR1-205ENST00000564540 OR56B2PQ8NGI1 322 aa2.58□□□□□ -2
UBR1-205ENST00000564540 OR10T2Q8NGX3 314 aa2.58□□□□□ -2
UBR1-205ENST00000564540 OR2T3Q8NH03 318 aa2.58□□□□□ -2
UBR1-205ENST00000564540 TCTEX1D2Q8WW35 142 aa2.58□□□□□ -2
UBR1-205ENST00000564540 GIMAP1Q8WWP7 306 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CTNNBL1Q8WYA6 563 aaPredicted RBP2.58□□□□□ -2
UBR1-205ENST00000564540 TCEANC2Q96MN5 208 aa2.58□□□□□ -2
UBR1-205ENST00000564540 PTBP2Q9UKA9 531 aaKnown RBP2.58□□□□□ -2
UBR1-205ENST00000564540 TRAPPC4Q9Y296 219 aa2.58□□□□□ -2
UBR1-205ENST00000564540 NSD2O96028 1365 aa2.58□□□□□ -2
UBR1-205ENST00000564540 CARMIL1Q5VZK9 1371 aa2.58□□□□□ -2
UBR1-205ENST00000564540 XKRY2A2RUG3 117 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TMEM150BA6NC51 233 aa2.57□□□□□ -2
UBR1-205ENST00000564540 SERPINE3A8MV23 424 aa2.57□□□□□ -2
UBR1-205ENST00000564540 K7EQM0 130 aa2.57□□□□□ -2
UBR1-205ENST00000564540 MAPK13O15264 365 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TBX19O60806 448 aa2.57□□□□□ -2
UBR1-205ENST00000564540 ADCY5O95622 1261 aa2.57□□□□□ -2
UBR1-205ENST00000564540 MBD3O95983 291 aa2.57□□□□□ -2
UBR1-205ENST00000564540 IGFBP3P17936 291 aaPredicted RBP2.57□□□□□ -2
UBR1-205ENST00000564540 TPSB2P20231 275 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TFPI2P48307 235 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TPSAB1Q15661 275 aa2.57□□□□□ -2
UBR1-205ENST00000564540 DEFB116Q30KQ4 102 aa2.57□□□□□ -2
UBR1-205ENST00000564540 GPRC6AQ5T6X5 926 aa2.57□□□□□ -2
UBR1-205ENST00000564540 NCR3LG1Q68D85 454 aa2.57□□□□□ -2
UBR1-205ENST00000564540 CTRB2Q6GPI1 263 aa2.57□□□□□ -2
UBR1-205ENST00000564540 C6orf120Q7Z4R8 191 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TPRA1Q86W33 373 aa2.57□□□□□ -2
UBR1-205ENST00000564540 CENPLQ8N0S6 344 aaPredicted RBP2.57□□□□□ -2
UBR1-205ENST00000564540 EIF1ADQ8N9N8 165 aaKnown RBP2.57□□□□□ -2
UBR1-205ENST00000564540 NPBQ8NG41 125 aa2.57□□□□□ -2
UBR1-205ENST00000564540 OR52K2Q8NGK3 314 aa2.57□□□□□ -2
UBR1-205ENST00000564540 OR13C2Q8NGS9 318 aa2.57□□□□□ -2
UBR1-205ENST00000564540 ACER1Q8TDN7 264 aa2.57□□□□□ -2
UBR1-205ENST00000564540 ST8SIA1Q92185 356 aa2.57□□□□□ -2
UBR1-205ENST00000564540 C4orf36Q96KX1 117 aa2.57□□□□□ -2
UBR1-205ENST00000564540 PSKH2Q96QS6 385 aa2.57□□□□□ -2
UBR1-205ENST00000564540 ZNF607Q96SK3 696 aa2.57□□□□□ -2
UBR1-205ENST00000564540 SECISBP2Q96T21 854 aaKnown RBP2.57□□□□□ -2
UBR1-205ENST00000564540 HIST1H4GQ99525 98 aa2.57□□□□□ -2
UBR1-205ENST00000564540 GPA33Q99795 319 aa2.57□□□□□ -2
UBR1-205ENST00000564540 FICDQ9BVA6 458 aa2.57□□□□□ -2
UBR1-205ENST00000564540 MRPL13Q9BYD1 178 aaKnown RBP2.57□□□□□ -2
UBR1-205ENST00000564540 CALHM2Q9HA72 323 aa2.57□□□□□ -2
UBR1-205ENST00000564540 FARSBQ9NSD9 589 aaKnown RBP2.57□□□□□ -2
UBR1-205ENST00000564540 ALG6Q9Y672 507 aa2.57□□□□□ -2
UBR1-205ENST00000564540 FRMPD4Q14CM0 1322 aa2.57□□□□□ -2
UBR1-205ENST00000564540 COL1A2P08123 1366 aa2.57□□□□□ -2
UBR1-205ENST00000564540 TPST2O60704 377 aa2.56□□□□□ -2
UBR1-205ENST00000564540 RPA2P15927 270 aa2.56□□□□□ -2
UBR1-205ENST00000564540 TBXA2RP21731 343 aa2.56□□□□□ -2
UBR1-205ENST00000564540 CXCR2P25025 360 aa2.56□□□□□ -2
UBR1-205ENST00000564540 EFNB2P52799 333 aa2.56□□□□□ -2
UBR1-205ENST00000564540 HSPA2P54652 639 aa2.56□□□□□ -2
UBR1-205ENST00000564540 DDX39BQ13838 428 aaKnown RBP2.56□□□□□ -2
UBR1-205ENST00000564540 PDK4Q16654 411 aa2.56□□□□□ -2
UBR1-205ENST00000564540 LRRC23Q53EV4 343 aaPredicted RBP2.56□□□□□ -2
UBR1-205ENST00000564540 TPGS2Q68CL5 300 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms