RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SLC6A15Q9H2J7 730 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 OR52D1Q9H346 318 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 TIGARQ9NQ88 270 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 ZMIZ1Q9ULJ6 1067 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 BAIAP2Q9UQB8 552 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 URB1O60287 2271 aaKnown RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 LOC100130705A0A1B0GUX0 176 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 LIPT2A6NK58 231 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SULT2B1O00204 365 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SLC16A6O15403 523 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 EIF1BO60739 113 aaKnown RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 CELA3AP09093 270 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ASAH2BP0C7U1 165 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ACADSP16219 412 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 GRPRP30550 384 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 RPL4P36578 427 aaKnown RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 RPS3AP61247 264 aaKnown RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 PMS2P3Q13401 168 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 LINC00303Q3SY05 128 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ANKRD34AQ69YU3 496 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 KRT80Q6KB66 452 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 CASP12Q6UXS9 341 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 C8orf59Q8N0T1 100 aaPredicted RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 ADPRHL1Q8NDY3 354 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 OR51A7Q8NH64 312 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 TFAP2CQ92754 450 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ABTB1Q969K4 478 aaPredicted RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 ARL5BQ96KC2 179 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 MOGAT1Q96PD6 335 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SLC38A2Q96QD8 506 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 PITX2Q99697 317 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 GPA33Q99795 319 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ANKRD60Q9BZ19 345 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 EGLN3Q9H6Z9 239 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SLC25A19Q9HC21 320 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 FAM118AQ9NWS6 357 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 PAQR5Q9NXK6 330 aaPredicted RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 MRPL39Q9NYK5 338 aaKnown RBP11.54□□□□□ -0.56
CLK3-214ENST00000564096 REV1Q9UBZ9 1251 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 TRAPPC4Q9Y296 219 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 B3GALT5Q9Y2C3 310 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 HIF3AQ9Y2N7 669 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 SLC6A5Q9Y345 797 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 IGF2RP11717 2491 aa11.54□□□□□ -0.56
CLK3-214ENST00000564096 ASPMQ8IZT6 3477 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 FTCDNL1E5RQL4 147 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 M0R082 166 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 DLGAP1O14490 977 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 EIF1AYO14602 144 aaKnown RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 FZD7O75084 574 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 WISP1O95388 367 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 IGHG3P01860 377 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 DIO1P49895 249 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 OR2B6P58173 313 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 MED21Q13503 144 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 BCL2A1Q16548 175 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 ALG10Q5BKT4 473 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 CLEC12AQ5QGZ9 265 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 HBMQ6B0K9 141 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 TMPPEQ6ZT21 453 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 OR2V1Q8NHB1 315 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 ZNF417Q8TAU3 575 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 CPNE4Q96A23 557 aaPredicted RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 PLEKHA8Q96JA3 519 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 HRASLS5Q96KN8 279 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 ZNF587Q96SQ5 575 aaPredicted RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 NAA11Q9BSU3 229 aaPredicted RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 IFT27Q9BW83 186 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 TSSK6Q9BXA6 273 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 MCCC2Q9HCC0 563 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 CHST11Q9NPF2 352 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
CLK3-214ENST00000564096 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 LRCH1Q9Y2L9 728 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 HSPE1-MOB4S4R3N1 261 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
CLK3-214ENST00000564096 HEATR5AQ86XA9 2040 aa11.52□□□□□ -0.56
CLK3-214ENST00000564096 A0A1W2PNR3 127 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 A0A1W2PNV4 684 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ZAR1LA6NP61 321 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 LRRN3E7EW58 273 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 BLOC1S5-TXNDC5H3BN57 136 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 K7EM74 188 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ERVH48-1M5A8F1 160 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 TNFSF11O14788 317 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 EFNA2O43921 213 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms