RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 INCA1Q0VD86 236 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 MESDQ14696 234 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 MEF2DQ14814 521 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 PSG3Q16557 428 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ZNF74Q16587 644 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC5A12Q1EHB4 618 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 GLYR1Q49A26 553 aaPredicted RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 LRRC37A5PQ49AS3 106 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ABHD17BQ5VST6 288 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 BHLHB9Q6PI77 547 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 MBOAT1Q6ZNC8 495 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 LANCL3Q6ZV70 420 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 Q71RC1 249 aaPredicted RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC35D2Q76EJ3 337 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 PID1Q7Z2X4 250 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 RBM23Q86U06 439 aaKnown RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 PALB2Q86YC2 1186 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ERI1Q8IV48 349 aaKnown RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 UBALD2Q8IYN6 164 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 PELI3Q8N2H9 469 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 CENPSQ8N2Z9 138 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 CCDC112Q8NEF3 446 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 OR52E5Q8NH55 327 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 FANK1Q8TC84 345 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 OTUB2Q96DC9 234 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 CCDC42Q96M95 316 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 NEDD4LQ96PU5 975 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 NAPGQ99747 312 aaPredicted RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 C7orf50Q9BRJ6 194 aaKnown RBP4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 NEUROG2Q9H2A3 272 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 LHX5Q9H2C1 402 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ANKRD19PQ9H560 264 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 FGF21Q9NSA1 209 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 CISHQ9NSE2 258 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 STMN3Q9NZ72 180 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 ANAPC7Q9UJX3 599 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 PACSIN3Q9UKS6 424 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 STUB1Q9UNE7 303 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 MTCH2Q9Y6C9 303 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 TCHHQ07283 1943 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 TANC1Q9C0D5 1861 aa4.58□□□□□ -1.68
VPS35P1-201ENST00000563400 MYH15Q9Y2K3 1946 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TRAV19A0A0A6YYK7 116 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 A0A1W2PQ72 361 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PRR32B1ATL7 298 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PROB1E7EW31 1015 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PRAMEF26H0Y7S4 382 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 FBP2O00757 339 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 RFXANKO14593 260 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 CASKO14936 926 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 RAB29O14966 203 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 RNASEH1O60930 286 aaKnown RBP4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 KRT33AO76009 404 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 DIRAS1O95057 198 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 CCNB2O95067 398 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 CLDN9O95484 217 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 RETP07949 1114 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC35G4P0C7Q5 338 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 UCHL3P15374 230 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PHEXP78562 749 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 GUCY2DQ02846 1103 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 ZP4Q12836 540 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PPP1R3AQ16821 1122 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 ZNF284Q2VY69 593 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TP53I3Q53FA7 332 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TCEAL5Q5H9L2 206 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TMEM31Q5JXX7 168 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TCHHL1Q5QJ38 904 aaPredicted RBP4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 MANEAQ5SRI9 462 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 GPR107Q5VW38 600 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 FAM122CQ6P4D5 195 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 FAM171BQ6P995 826 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 DEF8Q6ZN54 512 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 LRRC74BQ6ZQY2 392 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC26A9Q7LBE3 791 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TMEM17Q86X19 198 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 MFSD6LQ8IWD5 586 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 EID3Q8N140 333 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 CSNK1A1LQ8N752 337 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PPFIBP2Q8ND30 876 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 OR8K1Q8NGG5 319 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 OR1B1Q8NGR6 318 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 NUBPLQ8TB37 319 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TCP10LQ8TDR4 215 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 CAPSLQ8WWF8 208 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 NAT6Q93015 286 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PSMG2Q969U7 264 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 URM1Q9BTM9 101 aaKnown RBP4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 ILKAPQ9H0C8 392 aaPredicted RBP4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC25A51Q9H1U9 297 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 UBE2ZQ9H832 354 aaPredicted RBP4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 MAP6D1Q9H9H5 199 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 PELI2Q9HAT8 420 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 ABCC13Q9NSE7 274 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 SENP1Q9P0U3 644 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 GHRLQ9UBU3 117 aa4.57□□□□□ -1.68
VPS35P1-201ENST00000563400 TUBGCP4Q9UGJ1 667 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms