RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 POTEKPQ9BYX7 375 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ARMC7Q9H6L4 198 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 GP6Q9HCN6 339 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 BCL2L10Q9HD36 194 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 THUMPD1Q9NXG2 353 aaKnown RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 TRAPPC4Q9Y296 219 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 RNF115Q9Y4L5 304 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ALPK2Q86TB3 2170 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 LOC100653049A0A140TA62 436 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 A8MVM7 634 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 LRRN3E7EW58 273 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 FBP2O00757 339 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 GPR171O14626 319 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 HS3ST1O14792 307 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 KRT34O76011 436 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ITGA5P08648 1049 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 GPX2P18283 190 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 PPIBP23284 216 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 HOXC12P31275 282 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 CDKN1AP38936 164 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SELENOPP49908 381 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 RGS8P57771 180 aaPredicted RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TUBA1BP68363 451 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TUBA4AP68366 448 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 H3F3AP84243 136 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC25A3Q00325 362 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 EGR4Q05215 589 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC17A1Q14916 467 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 P2RY6Q15077 328 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 PDK3Q15120 406 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ADRM1Q16186 407 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 NIPAL3Q6P499 406 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 PAQR6Q6TCH4 344 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SEZ6L2Q6UXD5 910 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TUBA1AQ71U36 451 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 KRT73Q86Y46 540 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 RBM45Q8IUH3 476 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ARMC8Q8IUR7 673 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 C10orf53Q8N6V4 93 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ZIC4Q8N9L1 334 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 HIPK4Q8NE63 616 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 OR10A6Q8NH74 314 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 PIGTQ969N2 578 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 TAAR8Q969N4 342 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 MUCL1Q96DR8 90 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ANKRD27Q96NW4 1050 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 CGREF1Q99674 301 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 PTDSS2Q9BVG9 487 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 RABEP2Q9H5N1 569 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ESRP2Q9H6T0 727 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ASB6Q9NWX5 421 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC13A4Q9UKG4 626 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 ANGPT4Q9Y264 503 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC9A8Q9Y2E8 581 aa8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 FLNAP21333 2647 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 RAI1Q7Z5J4 1906 aaPredicted RBP8.34□□□□□ -1.07
NSMCE1-203ENST00000562039 SETD2Q9BYW2 2564 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 IGKV1D-42A0A075B6H8 117 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 OR5H1A6NKK0 313 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 AQP7P3A6NL99 342 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 CPSF4LA6NMK7 179 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 H7C1Q1 480 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 M0QX08 132 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 ABCD4O14678 606 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 DNPH1O43598 174 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 TPST2O60704 377 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 EIF1BO60739 113 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 SHOX2O60902 331 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 UPK3AO75631 287 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 SERPINI2O75830 405 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 KRT33AO76009 404 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 LGI1O95970 557 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 SOD3P08294 240 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 TROVE2P10155 538 aaKnown RBP eCLIP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 PNMTP11086 282 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 ETS2P15036 469 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 TNFRSF1BP20333 461 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 COX5AP20674 150 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 GTF2E2P29084 291 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 PRKAR1BP31321 381 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 PTH2RP49190 550 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 P2RY4P51582 365 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 SLC16A1P53985 500 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 CLDN17P56750 224 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 NCALDP61601 193 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 KLF10Q13118 480 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 OR1Q1Q15612 314 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 GABRA6Q16445 453 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 DUSP7Q16829 419 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 HIKESHIQ53FT3 197 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 RABL3Q5HYI8 236 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 ALG10BQ5I7T1 473 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 CARD17Q5XLA6 110 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 REP15Q6BDI9 236 aa8.33□□□□□ -1.08
NSMCE1-203ENST00000562039 DHRS4L2Q6PKH6 230 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms