RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TUBGCP3Q96CW5 907 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 DDIT4LQ96D03 193 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 COQ8BQ96D53 544 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 METTL2AQ96IZ6 378 aaKnown RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 PPP3R2Q96LZ3 170 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 NAA11Q9BSU3 229 aaPredicted RBP10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 PLK3Q9H4B4 646 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ATAD3AQ9NVI7 634 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 RLIMQ9NVW2 624 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 ZDHHC2Q9UIJ5 367 aa10.12□□□□□ -0.79
NSMCE1-202ENST00000561960 B9A039 149 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 TRIM13O60858 407 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 CRYAAP02489 173 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 CHRM4P08173 479 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 MAPK1P28482 360 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 CAPZA2P47755 286 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 CCT5P48643 541 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 POLR2HP52434 150 aaKnown RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC35A1P78382 337 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 KCNJ10P78508 379 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 TGFBR3Q03167 851 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 HNRNPA0Q13151 305 aaKnown RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 MAD2L1BPQ15013 274 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 PDCD2Q16342 344 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 CADM2Q8N3J6 435 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 C17orf78Q8N4C9 275 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 C3orf56Q8N813 242 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 C1orf162Q8NEQ5 155 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 ZNF837Q96EG3 531 aaPredicted RBP10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 SYT3Q9BQG1 590 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 TXLNGYQ9BZA5 131 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 NELFAQ9H3P2 528 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 TREM2Q9NZC2 230 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
NSMCE1-202ENST00000561960 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 TMEM129A0AVI4 362 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 TLDC2A0PJX2 215 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ZNF587BE7ETH6 402 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 H3BQF6 201 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 CBLP22681 906 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 CHI3L1P36222 383 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 RPL3P39023 403 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ALDH3B1P43353 468 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 PPOXP50336 477 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ARF1P84077 181 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ROR2Q01974 943 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ATAD3BQ5T9A4 648 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 ATG16L1Q676U5 607 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 SSX8Q7RTT4 187 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 RNF130Q86XS8 419 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 WDR60Q8WVS4 1066 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 CKAP2Q8WWK9 683 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 TAF15Q92804 592 aaKnown RBP eCLIP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 BCL2L2Q92843 193 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 GCDHQ92947 438 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 MOAP1Q96BY2 351 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 MS4A3Q96HJ5 214 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 EXD2Q9NVH0 621 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 TMEM45AQ9NWC5 275 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 PARPBPQ9NWS1 579 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 HIF1ANQ9NWT6 349 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 MYEF2Q9P2K5 600 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC35A3Q9Y2D2 325 aa10.1□□□□□ -0.79
NSMCE1-202ENST00000561960 LOC105371242A0A075B767 164 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 IGHV2OR16-5A0A0B4J2B6 119 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 LIPT2A6NK58 231 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 HMGN4O00479 90 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 ANKRD28O15084 1053 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 GSNP06396 782 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 TACSTD2P09758 323 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 PRG2P13727 222 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 ADRA2CP18825 462 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 NPR2P20594 1047 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 PRPS1L1P21108 318 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 COL8A2P25067 703 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 GIFP27352 417 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 RBMXP38159 391 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 KHKP50053 298 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 SEC24CP53992 1094 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 HPCAP84074 193 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 HOXC5Q00444 222 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 SNTB2Q13425 540 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 COX20Q5RI15 118 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 MRPL2Q5T653 305 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 CARD17Q5XLA6 110 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 TMEM225Q6GV28 225 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 FAHD2BQ6P2I3 314 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 BHLHB9Q6PI77 547 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 PEG10Q86TG7 708 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 MDP1Q86V88 176 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 LRP11Q86VZ4 500 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 VRK2Q86Y07 508 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 CLDND2Q8NHS1 167 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 ANP32BQ92688 251 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC25A36Q96CQ1 311 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 FAHD2AQ96GK7 314 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms