RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ITCHQ96J02 903 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 MPP4Q96JB8 637 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ZNF354BQ96LW1 612 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 C3orf30Q96M34 536 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CCDC115Q96NT0 180 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 DACH2Q96NX9 599 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 QRFPRQ96P65 431 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TNFRSF13CQ96RJ3 184 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 NPAS2Q99743 824 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 PIGQQ9BRB3 760 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CENPKQ9BS16 269 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FUZQ9BT04 418 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 HAUS8Q9BT25 410 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 C9orf16Q9BUW7 83 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 EFCAB11Q9BUY7 163 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 RIOK2Q9BVS4 552 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 OSBPL11Q9BXB4 747 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 YTHDF1Q9BYJ9 559 aaKnown RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 DPY30Q9C005 99 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TUBB1Q9H4B7 451 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 GORASP2Q9H8Y8 452 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 FAM60AQ9NP50 221 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PCDHB16Q9NRJ7 776 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ATAD3AQ9NVI7 634 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 MED29Q9NX70 200 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ATXN10Q9UBB4 475 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 VPS29Q9UBQ0 182 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 B4GALT7Q9UBV7 327 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 CTSFQ9UBX1 484 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ACAD8Q9UKU7 415 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ACSL5Q9ULC5 683 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 ZNF490Q9ULM2 529 aaPredicted RBP2.87□□□□□ -1.95
SPG11-225ENST00000561391 KCNS2Q9ULS6 477 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PDE10AQ9Y233 779 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 TIMM22Q9Y584 194 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 PCDHGB5Q9Y5G0 923 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 MAU2Q9Y6X3 613 aa2.87□□□□□ -1.95
SPG11-225ENST00000561391 RYR2Q92736 4967 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 A0A096LPI6 279 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 IGHV1-45A0A0A0MS14 117 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TEX13CA0A0J9YWL9 993 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RNF103-CHMP3A0A140T963 221 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PRSS51A0A1B0GVH4 220 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SMIM31A0A1B0GVY4 71 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 DHRS12A0PJE2 317 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MGAT4DA6NG13 374 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 HSPB2A8KAH6 182 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 GABRR3A8MPY1 467 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 IQCF5A8MTL0 148 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TEX22C9J3V5 150 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 H0YAE9 185 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 H3BNX3 289 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 KLRC4-KLRK1H3BQV0 150 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 FBP2O00757 339 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ANKRD28O15084 1053 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TAPBPO15533 448 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 IFNA14P01570 189 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 LYNP07948 512 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PRSS56P0CW18 603 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 G6PDP11413 515 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TSPAN8P19075 237 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 HNF1AP20823 631 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 LHCGRP22888 699 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 HRH2P25021 359 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 DPP4P27487 766 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PRDX3P30048 256 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 S100A3P33764 101 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TTKP33981 857 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 HPCAL1P37235 193 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MAGEA8P43361 318 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RPL5P46777 297 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC6A12P48065 614 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PRLHRP49683 370 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ARFIP1P53367 373 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PGGT1BP53609 377 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 EMP2P54851 167 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 DIO3P55073 304 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 FOXA1P55317 472 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NME5P56597 212 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 VSX2P58304 361 aaPredicted RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 MLF1P58340 268 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 UFM1P61960 85 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ESRRGP62508 458 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MS4A2Q01362 244 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 IRF8Q02556 426 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 CHRNB3Q05901 458 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ACSM2AQ08AH3 577 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TRAF3Q13114 568 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 GK3PQ14409 553 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PTGR1Q14914 329 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ABRAXAS2Q15018 415 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PDK3Q15120 406 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 HSPB2Q16082 182 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RPE65Q16518 533 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 BAK1Q16611 211 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 CYP51A1Q16850 503 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC5A12Q1EHB4 618 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PRTGQ2VWP7 1150 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms