RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TIMD4Q96H15 378 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GAL3ST1Q99999 423 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 MRI1Q9BV20 369 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 MRPL1Q9BYD6 325 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 CHIAQ9BZP6 476 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 DERL2Q9GZP9 239 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 IPPKQ9H8X2 491 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SEC61A2Q9H9S3 476 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SLC7A10Q9NS82 523 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SLC6A13Q9NSD5 602 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GIMAP4Q9NUV9 329 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 UBAP1Q9NZ09 502 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PURGQ9UJV8 347 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 ADAM29Q9UKF5 820 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PPIAL4EA0A075B759 164 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TRBV23-1A0A0A0MS06 115 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PPIAL4CA0A0B4J2A2 164 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 LCE6AA0A183 80 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 GXYLT2A0PJZ3 443 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ISPDA4D126 451 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PPIAL4DF5H284 164 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 H0YIV9 168 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 GOLGA6L22H0YM25 854 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 K7EIL1 84 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 SULT2B1O00204 365 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 FOXH1O75593 365 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 IGKV1D-16P01601 117 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PPIAL4FP0DN26 164 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 IGHV4-38-2P0DP08 117 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PAX7P23759 505 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ARL1P40616 181 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 MAGEA6P43360 314 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 DIO1P49895 249 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 SLC12A2P55011 1212 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TAS2R39P59534 338 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TUBA1BP68363 451 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TUBA4AP68366 448 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 CSNK2A1P68400 391 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 GUCY1A3Q02108 690 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 ZNF154Q13106 437 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 MAD2L1BPQ15013 274 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 PDK3Q15120 406 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 OR4D1Q15615 310 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 DEFB112Q30KQ8 113 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TBRG1Q3YBR2 411 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 DMRTC1Q5HYR2 192 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TEDDM1Q5T9Z0 273 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ABLIM2Q6H8Q1 611 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ZNF620Q6ZNG0 422 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TUBA1AQ71U36 451 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 COMMD6Q7Z4G1 85 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 MISPQ8IVT2 679 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 SAMD14Q8IZD0 417 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 FAM9CQ8IZT9 166 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 SYCE1Q8N0S2 351 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PARP8Q8N3A8 854 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 OR52E2Q8NGJ4 325 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ST7LQ8TDW4 575 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TRPC4APQ8TEL6 797 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ARL8AQ96BM9 186 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 TM4SF18Q96CE8 201 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 ZHX1-C8orf76Q96EF9 292 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 MRPL37Q9BZE1 423 aaKnown RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 C3orf14Q9HBI5 128 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 MMP26Q9NRE1 261 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 SIRT3Q9NTG7 399 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 LMBRD1Q9NUN5 540 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 PARPBPQ9NWS1 579 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 LEF1Q9UJU2 399 aaPredicted RBP4.49□□□□□ -1.69
HERC1-213ENST00000561359 WIPI2Q9Y4P8 454 aa4.49□□□□□ -1.69
HERC1-213ENST00000561359 DNAH1Q9P2D7 4330 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 IGHV2OR16-5A0A0B4J2B6 119 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 AGAP5A6NIR3 686 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 ZNF716A6NP11 495 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SUPT3HB4E1H0 165 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CLDN25C9JDP6 229 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NR5A2O00482 541 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SCDO00767 359 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SUPT3HO75486 399 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 KRT33AO76009 404 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 H6PDO95479 791 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 IGLV1-44P01699 117 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SFTPBP07988 381 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NGFRP08138 427 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NEFHP12036 1026 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CD1DP15813 335 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 MPIP34949 423 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 MAGEA3P43357 314 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 EVX1P49640 407 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SUMO1P63165 101 aaKnown RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 CCL8P80075 99 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NPRL3Q12980 569 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SLC29A2Q14542 456 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms