RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SLC19A3Q9BZV2 496 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 ANKRD19PQ9H560 264 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 DENND2DQ9H6A0 471 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-221ENST00000561276 YY1AP1Q9H869 796 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 CLCF1Q9UBD9 225 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 MCTS1Q9ULC4 181 aaKnown RBP9.2□□□□□ -0.94
LRRC28-221ENST00000561276 MED31Q9Y3C7 131 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 AP4S1Q9Y587 144 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
LRRC28-221ENST00000561276 A0A087WUU8 490 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 MBD3L4A6NDZ8 208 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 MBD3L3A6NE82 208 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 MBD3L5A6NJ08 208 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 FTCDNL1E5RQL4 147 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 LRRN3E7EW58 273 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 GNGT2O14610 69 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 SMAD9O15198 467 aaKnown RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 EIF1BO60739 113 aaKnown RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 KRT36O76013 467 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 AQP8O94778 261 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TOXO94900 526 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 AKR7A3O95154 331 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 CH25HO95992 272 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 IL2RAP01589 272 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 BGLAPP02818 100 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 KLK2P20151 261 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TIMP3P35625 211 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 NUP107P57740 925 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 PRKCDQ05655 676 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 PPP1R8Q12972 351 aaKnown RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 ZNF239Q16600 458 aaKnown RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 FGD3Q5JSP0 725 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 GTF2IRD2BQ6EKJ0 949 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TMEM225Q6GV28 225 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 PODNL1Q6PEZ8 512 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 ZNF730Q6ZMV8 503 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 SEM1Q6ZVN7 128 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 FCRLAQ7L513 359 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 GTF2IRD2Q86UP8 949 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 CCDC103Q8IW40 242 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 C10orf67Q8IYJ2 551 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 CDK20Q8IZL9 346 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TMEM99Q8N816 258 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 OR6S1Q8NH40 331 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 PFN4Q8NHR9 129 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 MBD3L2Q8NHZ7 208 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 BPIFA2Q96DR5 249 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 ZHX1-C8orf76Q96EF9 292 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 DHRS1Q96LJ7 313 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 ALPK1Q96QP1 1244 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 DMRTA2Q96SC8 542 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 NAA11Q9BSU3 229 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-221ENST00000561276 KLHL4Q9C0H6 718 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 C20orf141Q9NUB4 165 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TMCC3Q9ULS5 477 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 SLC5A6Q9Y289 635 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 ZNF175Q9Y473 711 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 U3KQV3 271 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 DOCK7Q96N67 2140 aa9.19□□□□□ -0.94
LRRC28-221ENST00000561276 TRBV4-1A0A0J9YWV2 114 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 SH3PXD2BA1X283 911 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 HTR3EA5X5Y0 456 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ZNF814B7Z6K7 855 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 TNFRSF11BO00300 401 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 CLOCKO15516 846 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 HNRNPRO43390 633 aaKnown RBP9.18□□□□□ -0.94
LRRC28-221ENST00000561276 DNPH1O43598 174 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 PIP5K1CO60331 668 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ENTPD5O75356 428 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 TIPRLO75663 272 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 RCBTB2O95199 551 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 MT-ATP6P00846 226 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 IFI30P13284 250 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 FUT1P19526 365 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 GRPRP30550 384 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 CEACAM8P31997 349 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-221ENST00000561276 PER3P56645 1201 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 RASGEF1BQ0VAM2 473 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ESPL1Q14674 2120 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 MFSD13AQ14CX5 517 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 SEC23BQ15437 767 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ZNF74Q16587 644 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 OTUD3Q5T2D3 398 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ZFYVE26Q68DK2 2539 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 PAQR6Q6TCH4 344 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 MBOAT2Q6ZWT7 520 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 H1FNTQ75WM6 255 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-221ENST00000561276 NRMQ8IXM6 262 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 SLC43A2Q8N370 569 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 LRRC17Q8N6Y2 441 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 C9orf106Q8NAJ2 232 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 RND1Q92730 232 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 INTS12Q96CB8 462 aaKnown RBP9.18□□□□□ -0.94
LRRC28-221ENST00000561276 FUZQ9BT04 418 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 REEP1Q9H902 201 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 RNF122Q9H9V4 155 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 NANSQ9NR45 359 aa9.18□□□□□ -0.94
LRRC28-221ENST00000561276 ARMC1Q9NVT9 282 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms