RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ABCA1O95477 2261 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 AQP7P3A6NL99 342 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 A8MVM7 634 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 PPIBP23284 216 aaKnown RBP15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 CDK6Q00534 326 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZNF672Q499Z4 452 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 C1orf140Q5VVS0 124 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 OR9K2Q8NGE7 335 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 COX4I2Q96KJ9 171 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZNF385AQ96PM9 386 aaKnown RBP15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 CPPED1Q9BRF8 314 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 TAPBPLQ9BX59 468 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 TRIM2Q9C040 744 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 NPHS2Q9NP85 383 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLC7A10Q9NS82 523 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 DCTN4Q9UJW0 460 aa15.14■□□□□ 0.01
CDC42BPB-208ENST00000561271 ABCA2Q9BZC7 2435 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ABCD4O14678 606 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 SASH3O75995 380 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 SOD3P08294 240 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ETS2P15036 469 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 AQP1P29972 269 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 PRKAR1BP31321 381 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZNF83P51522 516 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 CDH11P55287 796 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ATP5J2P56134 94 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 RPS4XP62701 263 aaKnown RBP15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 SPOCK1Q08629 439 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 TSPO2Q5TGU0 170 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 REEP3Q6NUK4 255 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 PRSS57Q6UWY2 283 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 P2RY8Q86VZ1 359 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 TMEM45BQ96B21 275 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 POM121Q96HA1 1249 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZNF385DQ9H6B1 395 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZNF701Q9NV72 531 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 UPB1Q9UBR1 384 aa15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 MAGED1Q9Y5V3 778 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 SONP18583 2426 aaKnown RBP15.13■□□□□ 0.01
CDC42BPB-208ENST00000561271 A0A1W2PP18 115 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SHISA9B4DS77 424 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 PDLIM1O00151 329 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SMAD7O15105 426 aaKnown RBP15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 NPIPB7O75200 414 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 AHSA1O95433 338 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 DANCRP0C864 163 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 PAX1P15863 534 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 HTR2AP28223 471 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 P2RY4P51582 365 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SCARB2Q14108 478 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 GABRA6Q16445 453 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 DLEU7Q6UYE1 221 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 AAED1Q7RTV5 226 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 DHDDSQ86SQ9 333 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 ZIC4Q8N9L1 334 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 PTDSS2Q9BVG9 487 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SF3B5Q9BWJ5 86 aaKnown RBP15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 TMEM45AQ9NWC5 275 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 PARPBPQ9NWS1 579 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 RPS6KB2Q9UBS0 482 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 CORO2BQ9UQ03 480 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLC25A15Q9Y619 301 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 GMEB1Q9Y692 573 aa15.12■□□□□ 0.01
CDC42BPB-208ENST00000561271 HIVEP2P31629 2446 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 ELOA3DA6NLF2 546 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 EVPLLA8MZ36 301 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 TPST1O60507 370 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 EDF1O60869 148 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 HOXB4P17483 251 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 GPX2P18283 190 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 CDKN1AP38936 164 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 RPS5P46782 204 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 IRX1P78414 480 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLC25A3Q00325 362 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 EGR4Q05215 589 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 LGALS3BPQ08380 585 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 PGGHGQ32M88 737 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 ELOA3BQ3SY89 546 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 DHRS4L2Q6PKH6 230 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 CLEC9AQ6UXN8 241 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SSX8Q7RTT4 187 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 KRT73Q86Y46 540 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 ELOA3Q8NG57 546 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 STK35Q8TDR2 534 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SMAP2Q8WU79 429 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 STON2Q8WXE9 905 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLC25A36Q96CQ1 311 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 AMBRA1Q9C0C7 1298 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SLCO5A1Q9H2Y9 848 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 RABEP2Q9H5N1 569 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 TMEM38AQ9H6F2 299 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 SEC14L4Q9UDX3 406 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 LEF1Q9UJU2 399 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 PRDM4Q9UKN5 801 aa15.11■□□□□ 0.01
CDC42BPB-208ENST00000561271 A0A0G2JND7 137 aa15.1■□□□□ 0.01
CDC42BPB-208ENST00000561271 A0A1B0GWA3 101 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms