RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CASP8Q14790 479 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TRAM2Q15035 370 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OXA1LQ15070 435 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TMED2Q15363 201 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR4D1Q15615 310 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TRIP6Q15654 476 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 ZNF77Q15935 545 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CCDC6Q16204 474 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 DUSP7Q16829 419 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ZNF672Q499Z4 452 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 UNC50Q53HI1 259 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 VWA2Q5GFL6 755 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SOHLH1Q5JUK2 328 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CDKL4Q5MAI5 379 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SEL1L2Q5TEA6 688 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 KHDRBS2Q5VWX1 349 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 REP15Q6BDI9 236 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR52E8Q6IFG1 317 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SLC18B1Q6NT16 456 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CERS6Q6ZMG9 384 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ZNF836Q6ZNA1 936 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 DBX2Q6ZNG2 339 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 STOX1Q6ZVD7 989 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PAGE2Q7Z2X7 111 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR2W3Q7Z3T1 314 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ABHD12BQ7Z5M8 362 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 MRPL10Q7Z7H8 261 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 UNC93AQ86WB7 457 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 VRK3Q8IV63 474 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 NRMQ8IXM6 262 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 DND1Q8IYX4 353 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 SLC22A15Q8IZD6 547 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TPRX1Q8N7U7 411 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 BEST4Q8NFU0 473 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR52B6Q8NGF0 335 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR5B3Q8NH48 314 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 OR52E5Q8NH55 327 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ZNF502Q8TBZ5 544 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 MRAPQ8TCY5 172 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CD99L2Q8TCZ2 262 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PYROXD1Q8WU10 500 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PHF10Q8WUB8 498 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 SECTM1Q8WVN6 248 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 APOBEC4Q8WW27 367 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 CACNG8Q8WXS5 425 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 GTF3AQ92664 365 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 BADQ92934 168 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 PPWD1Q96BP3 646 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 DNAJA3Q96EY1 480 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SCMH1Q96GD3 660 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CELF6Q96J87 481 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 ADGRG7Q96K78 797 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 C17orf77Q96MU5 243 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 RILPQ96NA2 401 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 C8orf49Q96NF6 230 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SERPINB11Q96P15 392 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SORCS2Q96PQ0 1159 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ALKBH3Q96Q83 286 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 TNFRSF13CQ96RJ3 184 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 EPYCQ99645 322 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 RBBP8Q99708 897 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 MICU1Q9BPX6 476 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 FAM173AQ9BQD7 235 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 TMEM121Q9BTD3 319 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 NAT9Q9BTE0 207 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 BDH2Q9BUT1 245 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 MCRIP2Q9BUT9 160 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 TMEM59Q9BXS4 323 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 HES7Q9BYE0 225 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 MRPS26Q9BYN8 205 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 SPRY4Q9C004 299 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SHARPINQ9H0F6 387 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SYT4Q9H2B2 425 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ATP13A3Q9H7F0 1226 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 METTL8Q9H825 291 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 NIPAL2Q9H841 368 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 NT5DC2Q9H857 520 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 EML4Q9HC35 981 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 ZFP64Q9NPA5 681 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ABCB10Q9NRK6 738 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 NRBP2Q9NSY0 501 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 ELOVL2Q9NXB9 296 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 CLEC5AQ9NY25 188 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 EURLQ9NYK6 297 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SENP1Q9P0U3 644 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 SLC17A7Q9P2U7 560 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 DCDC2Q9UHG0 476 aa1.77□□□□□ -2.13
RTF1-207ENST00000561076 UBQLN1Q9UMX0 589 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 YARS2Q9Y2Z4 477 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 RPL36Q9Y3U8 105 aaKnown RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 PUS1Q9Y606 427 aaKnown RBP eCLIP1.77□□□□□ -2.13
RTF1-207ENST00000561076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.77□□□□□ -2.13
RTF1-207ENST00000561076 PDS5BQ9NTI5 1447 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 UBN2Q6ZU65 1347 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CNTNAP2Q9UHC6 1331 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 NSG1A0A0A6YYJ2 146 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 A0A1B0GUA9 196 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 A0A1B0GUS0 222 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 A0A1W2PPE3 182 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 TSPAN11A1L157 253 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms